Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col5a3b | 0.309 | hmgb1b | -0.085 |
| col14a1b | 0.300 | marcksb | -0.079 |
| ecrg4b | 0.294 | si:ch211-288g17.3 | -0.074 |
| col17a1a | 0.290 | h2afva | -0.073 |
| LOC100538177 | 0.289 | si:dkey-56m19.5 | -0.070 |
| itgb3a | 0.287 | pfn2l | -0.066 |
| lgals1l1 | 0.283 | hnrnpa0a | -0.065 |
| cldn1 | 0.281 | marcksl1a | -0.065 |
| spaca4l | 0.277 | ddx39ab | -0.064 |
| lamb4 | 0.275 | hdac1 | -0.064 |
| zgc:101810 | 0.273 | si:ch211-137a8.4 | -0.064 |
| hcls1 | 0.271 | hmgb3a | -0.063 |
| kera | 0.270 | seta | -0.063 |
| si:dkey-102c8.3 | 0.267 | ilf2 | -0.062 |
| itgb1b.2 | 0.264 | nova2 | -0.062 |
| col7a1 | 0.263 | nucks1a | -0.062 |
| cxl34b.11 | 0.261 | tuba1c | -0.062 |
| itgb1b.1 | 0.259 | setb | -0.061 |
| zgc:136930 | 0.255 | snrpd1 | -0.061 |
| cldni | 0.251 | smarce1 | -0.060 |
| si:dkey-33c14.3 | 0.251 | cbx3a | -0.059 |
| zgc:86896 | 0.251 | ilf3b | -0.059 |
| myh9a | 0.248 | nono | -0.059 |
| padi2 | 0.244 | snrpe | -0.059 |
| krt91 | 0.242 | top1l | -0.059 |
| si:rp71-77l1.1 | 0.242 | hnrnpub | -0.058 |
| zgc:113223 | 0.241 | si:ch211-51e12.7 | -0.057 |
| si:dkey-183i3.5 | 0.240 | tuba1a | -0.057 |
| thy1 | 0.240 | apex1 | -0.056 |
| pfn1 | 0.237 | vdac1 | -0.056 |
| zgc:85932 | 0.235 | hnrnpa1a | -0.055 |
| krtt1c19e | 0.233 | mdkb | -0.055 |
| si:ch1073-406l10.2 | 0.230 | snrpb | -0.055 |
| aqp3a | 0.229 | snrpd2 | -0.055 |
| rbp4 | 0.222 | alyref | -0.054 |