| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.141 | NC-002333.4 | -0.120 |
| gtf2a1 | 0.125 | eef1a1l1 | -0.085 |
| AL935174.5 | 0.111 | hmgb2a | -0.084 |
| ttf1 | 0.111 | ncl | -0.078 |
| pho | 0.110 | rpl7a | -0.065 |
| ctbp1 | 0.110 | nucks1a | -0.064 |
| lamp2 | 0.108 | rpl11 | -0.062 |
| alyref | 0.108 | npm1a | -0.062 |
| hdgfl2 | 0.107 | si:ch211-222l21.1 | -0.059 |
| spink2.1 | 0.106 | srsf11 | -0.059 |
| tent4b | 0.105 | si:dkey-108k21.10 | -0.059 |
| ccna2 | 0.103 | rps15a | -0.058 |
| si:dkey-68o6.5 | 0.103 | rplp0 | -0.056 |
| ccna1 | 0.102 | rplp1 | -0.054 |
| acp5a | 0.100 | rps5 | -0.053 |
| tmed2 | 0.100 | ybx1 | -0.053 |
| dnajc1 | 0.098 | rps7 | -0.053 |
| gpatch4 | 0.098 | mt-co2 | -0.053 |
| slc25a44b | 0.096 | rpl27 | -0.052 |
| rbm7 | 0.096 | rps6 | -0.050 |
| mphosph6 | 0.095 | zgc:110425 | -0.049 |
| ubc | 0.095 | akap12b | -0.048 |
| pum1 | 0.094 | si:dkey-261m9.12 | -0.048 |
| stk35l | 0.094 | apoc1 | -0.048 |
| zgc:173742 | 0.094 | rps9 | -0.047 |
| zgc:113424 | 0.093 | si:ch211-262h13.3 | -0.047 |
| zcchc7 | 0.092 | si:ch211-113a14.18 | -0.046 |
| cdca7a | 0.091 | add3b | -0.046 |
| thoc2 | 0.091 | sox2 | -0.045 |
| xpc | 0.091 | hmgn2 | -0.045 |
| sugt1 | 0.090 | hmgn6 | -0.045 |
| brd2a | 0.090 | mt-nd5 | -0.044 |
| rcor1 | 0.090 | snrpd2 | -0.044 |
| golga7 | 0.090 | rpl9 | -0.044 |
| f11r.1 | 0.090 | XLOC-016582 | -0.044 |