| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slit1b | 0.612 | ptmab | -0.158 |
| clu | 0.592 | ptmaa | -0.119 |
| ctgfa | 0.534 | hnrnpaba | -0.116 |
| npr3 | 0.523 | khdrbs1a | -0.114 |
| myl9a | 0.501 | hmgb1b | -0.110 |
| arxa | 0.483 | hsp90ab1 | -0.108 |
| shhb | 0.480 | cirbpb | -0.106 |
| vasna | 0.470 | marcksb | -0.102 |
| r3hdml | 0.456 | h3f3d | -0.099 |
| spon1b | 0.456 | tubb2b | -0.096 |
| cyr61l2 | 0.446 | hnrnpa0l | -0.094 |
| wnt4b | 0.445 | si:ch211-288g17.3 | -0.093 |
| slit2 | 0.439 | hmgb3a | -0.093 |
| col9a3 | 0.438 | sox3 | -0.093 |
| BX908782.3 | 0.430 | elavl3 | -0.092 |
| shha | 0.425 | h2afvb | -0.091 |
| ptgs2a | 0.420 | ddx39ab | -0.089 |
| fxyd1 | 0.413 | hmgb2b | -0.088 |
| lcn15 | 0.410 | apex1 | -0.088 |
| scinlb | 0.406 | tmsb4x | -0.087 |
| scospondin | 0.405 | cirbpa | -0.086 |
| ntn1b | 0.404 | hnrnpa0b | -0.085 |
| gpc5b | 0.400 | hmgn2 | -0.084 |
| spon1a | 0.380 | XLOC-003689 | -0.084 |
| hpgd | 0.379 | h3f3a | -0.084 |
| sparcl1 | 0.365 | snrpf | -0.084 |
| sulf1 | 0.363 | tmeff1b | -0.084 |
| foxa1 | 0.360 | snrpd1 | -0.082 |
| si:dkey-208c12.2 | 0.357 | smarce1 | -0.082 |
| prf1.5 | 0.355 | seta | -0.080 |
| col8a1a | 0.346 | cct2 | -0.080 |
| aplnr2 | 0.345 | sox11b | -0.080 |
| olfml2ba | 0.332 | lfng | -0.079 |
| efnb3a | 0.331 | setb | -0.078 |
| spon2a | 0.328 | sb:cb81 | -0.078 |