| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbr1a | 0.317 | hmgb2a | -0.036 |
| eomesa | 0.270 | hmga1a | -0.030 |
| CDHR1 (1 of many) | 0.249 | stmn1a | -0.028 |
| emx3 | 0.200 | pcna | -0.028 |
| tbr1b | 0.192 | snu13b | -0.027 |
| neurod6b | 0.157 | id1 | -0.027 |
| ncs1b | 0.143 | sox3 | -0.026 |
| zmp:0000001069 | 0.131 | npm1a | -0.026 |
| flrt1b | 0.131 | sox11a | -0.026 |
| r3hdm1 | 0.129 | si:ch73-281n10.2 | -0.026 |
| emx1 | 0.121 | nop58 | -0.025 |
| ptprdb | 0.116 | msna | -0.025 |
| etv1 | 0.112 | tuba8l | -0.025 |
| efnb2a | 0.110 | sox19a | -0.025 |
| bcl11ba | 0.108 | chaf1a | -0.025 |
| tmem163b | 0.105 | anp32b | -0.025 |
| sipa1l2 | 0.104 | tuba8l4 | -0.024 |
| camk2n1a | 0.100 | ranbp1 | -0.024 |
| ebf3b | 0.099 | XLOC-003690 | -0.024 |
| sstr1a | 0.098 | zgc:56493 | -0.024 |
| ek1 | 0.095 | rrm1 | -0.024 |
| cdc42ep3 | 0.090 | her15.1 | -0.024 |
| kcnip1b | 0.089 | mki67 | -0.024 |
| fmn2a | 0.089 | mdka | -0.024 |
| mef2ab | 0.088 | lbr | -0.024 |
| slc17a6a | 0.088 | dkc1 | -0.023 |
| si:dkey-22o12.2 | 0.084 | si:ch73-386h18.1 | -0.023 |
| si:dkey-90l8.3 | 0.082 | nop56 | -0.023 |
| neurod1 | 0.081 | anp32a | -0.023 |
| neurod6a | 0.081 | dek | -0.023 |
| lhx9 | 0.078 | mcm7 | -0.023 |
| epha3 | 0.078 | ccng1 | -0.023 |
| gpr22a | 0.077 | ccnd1 | -0.023 |
| sox4a | 0.077 | rsl1d1 | -0.023 |
| elavl4 | 0.076 | fbl | -0.023 |