| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| eomesa | 0.477 | hmgb2a | -0.074 |
| CDHR1 (1 of many) | 0.410 | hmga1a | -0.069 |
| tbr1b | 0.352 | stmn1a | -0.059 |
| emx3 | 0.342 | pcna | -0.058 |
| tbx21 | 0.317 | id1 | -0.056 |
| r3hdm1 | 0.241 | sox11a | -0.053 |
| neurod6b | 0.219 | npm1a | -0.053 |
| ptprdb | 0.204 | zgc:56493 | -0.053 |
| tmem163b | 0.204 | si:dkey-151g10.6 | -0.052 |
| flrt1b | 0.195 | selenoh | -0.052 |
| slc17a6a | 0.190 | banf1 | -0.052 |
| mef2ab | 0.189 | sox3 | -0.051 |
| sstr1a | 0.183 | ranbp1 | -0.051 |
| efnb2a | 0.181 | anp32b | -0.050 |
| sipa1l2 | 0.179 | snu13b | -0.050 |
| camk2n1a | 0.178 | nop58 | -0.050 |
| cdc42ep3 | 0.175 | mdka | -0.050 |
| zmp:0000001069 | 0.175 | rplp1 | -0.049 |
| emx1 | 0.169 | chaf1a | -0.049 |
| fmn2a | 0.167 | si:ch73-281n10.2 | -0.049 |
| ncs1b | 0.167 | hmgb2b | -0.049 |
| si:dkey-22o12.2 | 0.165 | msna | -0.049 |
| ek1 | 0.165 | tuba8l4 | -0.048 |
| bcl11ba | 0.159 | dkc1 | -0.048 |
| stxbp1b | 0.157 | ccnd1 | -0.047 |
| necab1 | 0.156 | mki67 | -0.047 |
| olfm1a | 0.156 | tuba8l | -0.047 |
| camkvl | 0.148 | sox19a | -0.047 |
| elavl4 | 0.144 | her15.1 | -0.046 |
| mef2cb | 0.144 | rrm1 | -0.046 |
| lhx9 | 0.143 | lig1 | -0.046 |
| ajap1 | 0.141 | pa2g4b | -0.046 |
| strbp | 0.141 | lbr | -0.046 |
| rprma | 0.139 | XLOC-003690 | -0.046 |
| etv1 | 0.137 | chd7 | -0.046 |