see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-043852 | 0.672 | hmgb2a | -0.103 |
| FO704813.1 | 0.665 | si:ch211-222l21.1 | -0.099 |
| cpa4 | 0.620 | h3f3d | -0.098 |
| CU468917.1 | 0.599 | tubb4b | -0.093 |
| TMCC1 | 0.581 | ubc | -0.091 |
| itgbl1 | 0.537 | ybx1 | -0.088 |
| zgc:92137 | 0.510 | rps9 | -0.084 |
| pdia2 | 0.482 | tuba8l4 | -0.084 |
| ubxn2a | 0.462 | hmgn2 | -0.083 |
| crispld1b | 0.462 | khdrbs1a | -0.082 |
| ctrl | 0.459 | cirbpb | -0.082 |
| ca8 | 0.456 | hmgb2b | -0.081 |
| cpa5 | 0.453 | hmgn7 | -0.078 |
| nedd4a | 0.447 | hnrnpaba | -0.078 |
| si:dkey-226m8.10 | 0.446 | hmga1a | -0.077 |
| sycn.2 | 0.427 | h2afvb | -0.076 |
| si:dkey-14d8.6 | 0.419 | si:ch73-1a9.3 | -0.076 |
| zgc:112160 | 0.413 | srsf3b | -0.076 |
| amy2a | 0.408 | rps3a | -0.073 |
| gareml | 0.407 | cd9b | -0.072 |
| adcy8 | 0.397 | rps25 | -0.072 |
| col8a2 | 0.393 | hnrnpabb | -0.071 |
| c6ast4 | 0.393 | dynll1 | -0.071 |
| erp27 | 0.384 | si:dkey-56m19.5 | -0.071 |
| cry1ab | 0.382 | si:ch73-281n10.2 | -0.069 |
| aspn | 0.368 | nucks1a | -0.069 |
| ela2l | 0.363 | rbm8a | -0.067 |
| cel.1 | 0.363 | seta | -0.067 |
| prss59.1 | 0.359 | ptmaa | -0.066 |
| cspg5b | 0.348 | ran | -0.066 |
| sema3c | 0.347 | ywhae1 | -0.065 |
| CELA1 (1 of many) | 0.330 | h2afx1 | -0.065 |
| zgc:136461 | 0.326 | acin1a | -0.065 |
| spink4 | 0.323 | eif3m | -0.065 |
| XLOC-009640 | 0.313 | hmgb1b | -0.064 |