see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| myom2a | 0.334 | hsp90ab1 | -0.269 |
| mylpfb | 0.323 | h3f3d | -0.262 |
| tnnt3b | 0.322 | cirbpb | -0.249 |
| slc25a4 | 0.321 | pabpc1a | -0.243 |
| tnni2a.4 | 0.320 | h2afvb | -0.235 |
| mylz3 | 0.319 | khdrbs1a | -0.230 |
| eef2l2 | 0.318 | si:ch73-1a9.3 | -0.229 |
| casq1a | 0.316 | fthl27 | -0.227 |
| CABZ01061524.1 | 0.315 | ran | -0.225 |
| si:ch73-367p23.2 | 0.313 | naca | -0.225 |
| ryr3 | 0.310 | hmga1a | -0.222 |
| pvalb1 | 0.310 | ubc | -0.219 |
| myoz1b | 0.309 | hnrnpaba | -0.219 |
| pvalb2 | 0.308 | actb2 | -0.219 |
| hhatla | 0.302 | cirbpa | -0.218 |
| mylpfa | 0.300 | hmgn6 | -0.214 |
| si:ch211-255p10.3 | 0.295 | hmgn2 | -0.213 |
| tnnc2 | 0.294 | hmgb2b | -0.212 |
| actn3a | 0.294 | ptmab | -0.210 |
| myom1a | 0.293 | cfl1 | -0.206 |
| tpma | 0.292 | eef1a1l1 | -0.204 |
| myhz1.3 | 0.291 | si:ch211-222l21.1 | -0.202 |
| neb | 0.290 | hmgn7 | -0.202 |
| tnnt3a | 0.289 | si:ch73-281n10.2 | -0.201 |
| myl1 | 0.288 | hmgb2a | -0.200 |
| ckmb | 0.284 | hnrnpabb | -0.199 |
| acta1b | 0.284 | hnrnpa0b | -0.196 |
| ckma | 0.283 | snrpf | -0.196 |
| tmod4 | 0.283 | syncrip | -0.195 |
| ryr1b | 0.282 | setb | -0.190 |
| prr33 | 0.278 | rbm8a | -0.190 |
| atp2a1l | 0.278 | cbx3a | -0.190 |
| smyd1a | 0.275 | snrpb | -0.188 |
| myoz2a | 0.274 | tuba8l4 | -0.186 |
| myhz1.1 | 0.273 | hspa8 | -0.184 |