see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| g6pca.1 | 0.441 | hmgb1b | -0.083 |
| abcb11b | 0.432 | marcksl1a | -0.080 |
| si:ch211-170d8.5 | 0.430 | gnb1b | -0.077 |
| serpinf2a | 0.429 | hmgb3a | -0.077 |
| si:ch211-288g17.4 | 0.429 | tuba1c | -0.076 |
| a2ml | 0.424 | ywhaqb | -0.076 |
| aqp12 | 0.424 | h2afva | -0.074 |
| c3a.3 | 0.424 | ckbb | -0.073 |
| zgc:112265 | 0.420 | jpt1b | -0.073 |
| si:ch211-186e20.7 | 0.419 | marcksb | -0.073 |
| hal | 0.418 | gapdhs | -0.072 |
| cfb | 0.416 | gpm6aa | -0.072 |
| shbg | 0.416 | hnrnpa0a | -0.072 |
| c8a | 0.415 | nova2 | -0.072 |
| si:ch1073-464p5.5 | 0.415 | nucks1a | -0.072 |
| vtna | 0.415 | hdac1 | -0.069 |
| apoba | 0.414 | si:ch211-288g17.3 | -0.069 |
| f7i | 0.414 | rnasekb | -0.068 |
| si:dkey-105h12.2 | 0.414 | mdkb | -0.066 |
| cpb2 | 0.413 | vdac1 | -0.066 |
| ugp2a | 0.413 | si:ch1073-429i10.3.1 | -0.066 |
| f7 | 0.413 | acin1a | -0.065 |
| agt | 0.412 | chd4a | -0.065 |
| c3a.1 | 0.412 | gpm6ab | -0.065 |
| c5 | 0.411 | atrx | -0.064 |
| f2 | 0.410 | zc4h2 | -0.064 |
| itih3a | 0.410 | csnk1a1 | -0.063 |
| serpinc1 | 0.410 | gnb1a | -0.063 |
| serpind1 | 0.410 | hp1bp3 | -0.063 |
| si:dkey-22f5.9 | 0.410 | srsf3b | -0.063 |
| fga | 0.409 | anp32a | -0.062 |
| kng1 | 0.409 | h2afy2 | -0.062 |
| oxct1b | 0.409 | tuba1a | -0.062 |
| vtnb | 0.409 | CABZ01080702.1 | -0.061 |
| sec14l7 | 0.408 | cbx5 | -0.061 |