| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| uncx | 0.250 | XLOC-003690 | -0.098 |
| si:ch73-380l10.2 | 0.250 | id1 | -0.094 |
| skor1b | 0.229 | her15.1 | -0.085 |
| nrn1a | 0.193 | cldn5a | -0.083 |
| uncx4.1 | 0.184 | msna | -0.081 |
| pou4f1 | 0.168 | mdka | -0.075 |
| ebf3a | 0.166 | notch3 | -0.075 |
| evx1 | 0.160 | sox3 | -0.074 |
| dclk2a | 0.158 | sdc4 | -0.073 |
| scrt1a | 0.157 | hmgb2a | -0.072 |
| si:dkey-280e21.3 | 0.149 | si:ch73-281n10.2 | -0.071 |
| jagn1a | 0.148 | XLOC-003689 | -0.071 |
| evx2 | 0.146 | vamp3 | -0.069 |
| lzts1 | 0.145 | msi1 | -0.067 |
| stap2a | 0.143 | cd82a | -0.066 |
| atp2b1a | 0.140 | COX7A2 (1 of many) | -0.065 |
| myt1a | 0.140 | sparc | -0.064 |
| nrxn1a | 0.139 | her4.1 | -0.064 |
| stxbp1a | 0.138 | fabp7a | -0.063 |
| tfap2a | 0.138 | sox19a | -0.063 |
| pyyb | 0.137 | XLOC-003692 | -0.062 |
| nsg2 | 0.136 | her12 | -0.062 |
| hoxa9a | 0.133 | marcksl1a | -0.061 |
| map1aa | 0.132 | tuba8l | -0.060 |
| pdzrn4 | 0.132 | gpm6bb | -0.060 |
| lhx1a | 0.131 | btg2 | -0.060 |
| hs3st3l | 0.130 | atp1a1b | -0.059 |
| lbx1a | 0.130 | sb:cb81 | -0.059 |
| mllt11 | 0.130 | stmn1a | -0.058 |
| zgc:153395 | 0.128 | her4.2 | -0.058 |
| scrt2 | 0.128 | fosab | -0.058 |
| cnih3 | 0.128 | psat1 | -0.057 |
| slc17a6a | 0.127 | pcna | -0.057 |
| zgc:77784 | 0.127 | si:ch73-265d7.2 | -0.056 |
| iqsec1b | 0.127 | pgrmc1 | -0.056 |