| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| six1a | 0.220 | fgfbp2b | -0.096 |
| eya1 | 0.213 | ecrg4a | -0.092 |
| six4b | 0.189 | si:ch211-156j16.1 | -0.087 |
| ccl25b | 0.177 | mia | -0.087 |
| prrx1b | 0.161 | fgfr3 | -0.085 |
| si:ch211-152c2.3 | 0.156 | hand2 | -0.085 |
| irx1b | 0.143 | barx1 | -0.083 |
| cdh11 | 0.138 | snorc | -0.083 |
| pmp22a | 0.132 | hapln1b | -0.078 |
| six4a | 0.130 | acana | -0.078 |
| prrx1a | 0.130 | dlx4a | -0.075 |
| crabp2a | 0.124 | si:dkey-19b23.8 | -0.072 |
| fibina | 0.123 | dlx3b | -0.070 |
| tnc | 0.121 | emilin3a | -0.070 |
| fthl27 | 0.119 | pitx1 | -0.070 |
| cd248b | 0.119 | matn1 | -0.068 |
| inka1b | 0.114 | tnxba | -0.068 |
| si:dkey-261h17.1 | 0.114 | dlx5a | -0.068 |
| cthrc1a | 0.112 | nkx3.2 | -0.067 |
| eya2 | 0.110 | pcolceb | -0.066 |
| six2a | 0.110 | ptgdsa | -0.065 |
| postnb | 0.108 | si:dkey-12l12.1 | -0.065 |
| tuba8l3 | 0.108 | wwp2 | -0.064 |
| mfap2 | 0.106 | gyg1b | -0.064 |
| gstt1a | 0.105 | wisp3 | -0.063 |
| lbx2 | 0.105 | mdkb | -0.062 |
| BX324132.3 | 0.103 | twist2 | -0.062 |
| alx1 | 0.102 | csgalnact1a | -0.062 |
| fap | 0.102 | sept8b | -0.062 |
| twist1a | 0.101 | ppp1r1c | -0.061 |
| ca6 | 0.100 | nog3 | -0.060 |
| nog1 | 0.099 | meltf | -0.060 |
| si:ch211-286o17.1 | 0.097 | podxl | -0.060 |
| col11a1b | 0.097 | dlx4b | -0.060 |
| aspn | 0.096 | acanb | -0.058 |