| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| prdm1a | 0.540 | gpm6aa | -0.230 |
| XLOC-014477 | 0.468 | h2afx1 | -0.219 |
| si:ch73-28h20.1 | 0.457 | nova2 | -0.207 |
| nr2e3 | 0.448 | mdkb | -0.199 |
| RASSF5 | 0.435 | mdh1aa | -0.190 |
| msi1 | 0.428 | ldhba | -0.162 |
| gngt2a | 0.421 | ywhaqb | -0.159 |
| pde6gb | 0.416 | tmsb4x | -0.156 |
| rxrga | 0.410 | pax6a | -0.155 |
| dscamb | 0.408 | marcksl1a | -0.149 |
| zgc:109965 | 0.405 | fxyd6l | -0.149 |
| aplnrb | 0.404 | pax6b | -0.148 |
| samd7 | 0.400 | tox | -0.145 |
| prdm1b | 0.388 | ndrg4 | -0.138 |
| rxrgb | 0.383 | fam168a | -0.138 |
| nr2f1b | 0.379 | si:dkey-56m19.5 | -0.135 |
| neurod1 | 0.379 | rtn1a | -0.131 |
| six7 | 0.369 | cspg5a | -0.130 |
| otx5 | 0.363 | vsx1 | -0.128 |
| zgc:112294 | 0.357 | six3b | -0.126 |
| fkbp1ab | 0.341 | scrt2 | -0.126 |
| dnmbp | 0.341 | her15.1 | -0.121 |
| kif19 | 0.334 | pcbp3 | -0.120 |
| XLOC-004335 | 0.324 | mbd3b | -0.120 |
| crx | 0.316 | id1 | -0.118 |
| hsp90aa1.2 | 0.309 | gng13b | -0.117 |
| fabp7a | 0.308 | calb2b | -0.116 |
| opn6a | 0.305 | sox11a | -0.116 |
| elovl4b | 0.304 | kdm6bb | -0.115 |
| myclb | 0.302 | gng3 | -0.112 |
| tmx3a | 0.293 | zgc:110158 | -0.111 |
| arhgap20 | 0.292 | nat8l | -0.111 |
| si:dkey-187e18.1 | 0.291 | sox2 | -0.110 |
| arid3b | 0.285 | zc4h2 | -0.107 |
| isl2a | 0.284 | ywhah | -0.106 |