si:ch211-255i20.3 (neural): Daniocell

Daniocell

si:ch211-255i20.3 (neural)

si:ch211-255i20.3 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
tmed6	0.425	marcksl1b	-0.039
erp27	0.401	si:ch211-222l21.1	-0.035
pdia2	0.391	h3f3d	-0.035
endou	0.358	marcksb	-0.032
fep15	0.338	ptmab	-0.031
spink4	0.329	hmgb1b	-0.030
apoda.2	0.328	hmgn6	-0.029
si:ch211-173a9.6	0.322	nova2	-0.029
aqp12	0.295	si:ch73-1a9.3	-0.029
BX908782.1	0.274	tuba1a	-0.027
cpb1	0.252	hmgb3a	-0.026
slc22a16	0.242	hnrnpaba	-0.025
cel.1	0.215	hnrnpa0a	-0.024
si:ch211-240l19.5	0.204	hnrnpa0b	-0.023
cpa5	0.202	si:ch211-137a8.4	-0.023
prss1	0.199	jpt1b	-0.023
ANPEP	0.198	tuba1c	-0.023
cpa4	0.197	si:ch211-288g17.3	-0.023
agxta	0.193	sox11b	-0.022
nupr1b	0.190	si:dkey-276j7.1	-0.022
vtnb	0.184	elavl3	-0.022
ctrb1	0.179	tubb2b	-0.022
ttc36	0.176	khdrbs1a	-0.022
mat1a	0.175	si:dkey-56m19.5	-0.021
si:ch211-163l21.8	0.170	gnb1b	-0.021
si:ch211-240l19.6	0.161	tmeff1b	-0.021
gnmt	0.158	pbx4	-0.020
gfi1aa	0.155	chd4a	-0.020
si:dkey-14d8.7	0.152	cirbpb	-0.020
rltgr	0.151	mdkb	-0.019
fkbp11	0.150	hmga1a	-0.019
prss59.2	0.148	syncrip	-0.019
serpinf2b	0.147	XLOC-003690	-0.019
CELA1 (1 of many)	0.147	hnrnpa1a	-0.019
cel.2	0.145	hdac1	-0.019