| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shox | 0.287 | hmgb2a | -0.099 |
| vsx2 | 0.193 | id1 | -0.096 |
| lhx4 | 0.187 | pcna | -0.093 |
| tcf7l2 | 0.171 | chaf1a | -0.080 |
| LHX3 | 0.171 | sox3 | -0.079 |
| nrn1a | 0.134 | ccnd1 | -0.079 |
| stmn1b | 0.129 | banf1 | -0.079 |
| tmsb | 0.115 | selenoh | -0.076 |
| elavl3 | 0.113 | lig1 | -0.076 |
| tfap2d | 0.113 | npm1a | -0.076 |
| adcyap1b | 0.110 | dkc1 | -0.075 |
| bnc2 | 0.107 | cdca7b | -0.074 |
| gng2 | 0.106 | msna | -0.074 |
| ebf3a | 0.105 | akap12b | -0.074 |
| ptmaa | 0.105 | mcm6 | -0.074 |
| lhx9 | 0.102 | hspb1 | -0.073 |
| gng3 | 0.102 | nop56 | -0.073 |
| zc4h2 | 0.102 | sox19a | -0.072 |
| tuba1c | 0.101 | aldob | -0.072 |
| h2afx1 | 0.098 | nop58 | -0.072 |
| rtn1a | 0.098 | mki67 | -0.071 |
| sox4b | 0.098 | vamp3 | -0.071 |
| fev | 0.097 | mcm3 | -0.071 |
| gpm6aa | 0.097 | anp32b | -0.071 |
| tubb5 | 0.097 | rrm1 | -0.071 |
| hmgb3a | 0.095 | cdca7a | -0.071 |
| fez1 | 0.093 | fen1 | -0.071 |
| chd4a | 0.092 | mcm5 | -0.070 |
| phox2bb | 0.092 | si:ch73-281n10.2 | -0.070 |
| ctnnbip1 | 0.091 | fbl | -0.069 |
| gpm6ab | 0.090 | nasp | -0.069 |
| islr2 | 0.090 | nutf2l | -0.069 |
| ckbb | 0.090 | sdc4 | -0.069 |
| si:dkey-276j7.1 | 0.090 | cldn5a | -0.069 |
| ywhah | 0.089 | her8a | -0.069 |