| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| noto | 0.269 | krt8 | -0.201 |
| twist2 | 0.269 | zgc:113232 | -0.201 |
| epha2a | 0.267 | si:ch73-23l24.1 | -0.200 |
| fgf4 | 0.258 | col9a1b | -0.186 |
| epha4a | 0.246 | krt18a.1 | -0.184 |
| foxa2 | 0.242 | epyc | -0.179 |
| lhx1a | 0.226 | col9a2 | -0.177 |
| gdf11 | 0.223 | col11a2 | -0.175 |
| cdx4 | 0.219 | ucmab | -0.175 |
| fn1a | 0.218 | zmp:0000000760 | -0.174 |
| hoxc13a | 0.215 | cmn | -0.164 |
| foxa | 0.214 | matn3a | -0.162 |
| efnb2b | 0.212 | krt5 | -0.162 |
| sp5l | 0.212 | col2a1a | -0.159 |
| cdkn1ca | 0.210 | slc3a2a | -0.158 |
| fgf3 | 0.207 | col9a3 | -0.153 |
| fibinb | 0.204 | cnmd | -0.152 |
| rgma | 0.204 | rgcc | -0.149 |
| wnt5b | 0.201 | si:dkey-31g6.6 | -0.148 |
| emid1 | 0.199 | col11a1a | -0.147 |
| nradd | 0.196 | snorc | -0.144 |
| prickle1b | 0.195 | chad | -0.144 |
| notch1a | 0.195 | mmp23bb | -0.139 |
| emilin3a | 0.194 | wfdc2 | -0.138 |
| fgf8a | 0.194 | gas2b | -0.137 |
| hoxc13b | 0.189 | ehd2b | -0.137 |
| angptl6 | 0.188 | fgfr3 | -0.136 |
| hspb1 | 0.188 | sparc | -0.136 |
| tmem119b | 0.184 | cav2 | -0.135 |
| etv4 | 0.184 | krt94 | -0.134 |
| pmp22b | 0.182 | selenom | -0.133 |
| hoxc3a | 0.182 | tgfbi | -0.131 |
| sept6 | 0.182 | igsf10 | -0.131 |
| hjv | 0.180 | matn3b | -0.131 |
| hmgn6 | 0.179 | nid1a | -0.130 |