SPDEF (neural): Daniocell

Daniocell

SPDEF (neural)

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
scospondin	0.265	si:dkey-56m19.5	-0.014
XLOC-023308	0.172	si:ch211-152c2.3	-0.014
CU929150.2	0.143	stm	-0.014
TC2N	0.140	sox11b	-0.014
dclk3	0.124	si:ch211-222l21.1	-0.013
adgrg2a	0.109	pou5f3	-0.013
foxj1a	0.106	apoc1	-0.013
ldlrad2	0.100	LOC798783	-0.012
si:ch211-155m12.5	0.095	crabp2b	-0.012
dnah12	0.089	polr3gla	-0.012
tbata	0.086	si:ch73-21g5.7	-0.012
mfsd4aa	0.085	tmsb	-0.012
rab36	0.085	LOC108190024	-0.011
ferd3l	0.083	hmgb3a	-0.011
cdc42ep1b	0.079	si:ch211-57n23.4	-0.011
stmnd1	0.078	cdx4	-0.011
pacrg	0.078	gadd45gb.1	-0.011
si:dkey-27p23.3	0.077	dlb	-0.011
lrrc23	0.074	ptmab	-0.011
wnt4a	0.073	elavl3	-0.011
tekt1	0.070	COX7A2	-0.011
kif17	0.069	si:ch1073-80i24.3	-0.011
rock2bl	0.069	si:dkey-66i24.9	-0.010
LOC100333235	0.069	pkdccb	-0.010
CT573423.1	0.068	BX530077.1	-0.010
si:ch211-163l21.7	0.068	hnrnpm	-0.010
CR352265.3	0.067	insm1a	-0.010
si:dkey-34d22.1	0.067	cyp26a1	-0.010
rspo2	0.066	asb11	-0.010
ccdc146	0.065	zmp:0000000624	-0.010
fbxo36b	0.065	CU634008.1	-0.010
fabp7b	0.064	nhlh2	-0.010
si:ch211-248e11.2	0.064	shisa2a	-0.010
gpr37l1a	0.063	rnf165a	-0.009
ccdc173	0.063	otpa	-0.009