| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| six3b | 0.316 | tmsb1 | -0.199 |
| foxe3 | 0.260 | krtt1c19e | -0.197 |
| si:dkey-261h17.1 | 0.251 | krt5 | -0.188 |
| pitx3 | 0.249 | rbp4 | -0.182 |
| krt18a.1 | 0.246 | si:dkey-33c14.3 | -0.176 |
| pitx2 | 0.244 | cotl1 | -0.176 |
| nid2a | 0.230 | krt4 | -0.171 |
| six3a | 0.227 | gapdhs | -0.171 |
| prdm12a | 0.217 | krt91 | -0.168 |
| bmper | 0.216 | col1a1b | -0.165 |
| arl3l1 | 0.213 | col14a1b | -0.163 |
| si:ch211-152c2.3 | 0.209 | cxl34b.11 | -0.163 |
| lamb1a | 0.208 | capns1a | -0.159 |
| sox3 | 0.207 | pfn1 | -0.157 |
| cx43.4 | 0.202 | zgc:136930 | -0.157 |
| six1b | 0.195 | anxa1a | -0.157 |
| nme3 | 0.195 | cyt1 | -0.155 |
| cxcl12b | 0.192 | aqp3a | -0.154 |
| dlx4b | 0.189 | wu:fb18f06 | -0.153 |
| otx2a | 0.186 | lgals1l1 | -0.152 |
| si:ch211-67e16.11 | 0.185 | si:rp71-77l1.1 | -0.151 |
| h3f3d | 0.184 | col1a1a | -0.150 |
| arid3b | 0.183 | col4a5 | -0.149 |
| pdgfab | 0.183 | col11a1a | -0.149 |
| zgc:101100 | 0.183 | cebpd | -0.149 |
| pax6b | 0.183 | eef1da | -0.148 |
| otx1 | 0.183 | pycard | -0.146 |
| pcdh7b | 0.181 | col4a6 | -0.146 |
| aldoaa | 0.178 | si:dkey-183i3.5 | -0.145 |
| zbtb16a | 0.178 | aep1 | -0.144 |
| khdrbs1a | 0.177 | s100a10b | -0.144 |
| si:ch211-222l21.1 | 0.176 | ak1 | -0.143 |
| bambia | 0.175 | wu:fa03e10 | -0.142 |
| her15.1 | 0.175 | epgn | -0.141 |
| p2rx3a | 0.173 | cap1 | -0.139 |