Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax5 | 0.106 | elavl3 | -0.028 |
| cnpy1 | 0.105 | rtn1a | -0.026 |
| fgf8b | 0.103 | ptmaa | -0.025 |
| slf1 | 0.101 | gpm6ab | -0.025 |
| en2a | 0.093 | elavl4 | -0.024 |
| ism1 | 0.083 | gng3 | -0.023 |
| il17rd | 0.080 | stmn1b | -0.023 |
| en2b | 0.079 | tuba1c | -0.022 |
| fgf4 | 0.075 | stx1b | -0.022 |
| CABZ01094390.1 | 0.066 | rtn1b | -0.022 |
| her11 | 0.066 | ckbb | -0.022 |
| zcchc7 | 0.066 | tubb5 | -0.022 |
| en1b | 0.065 | sncb | -0.021 |
| pax8 | 0.057 | vamp2 | -0.021 |
| fgf3 | 0.056 | atp6v0cb | -0.021 |
| XLOC-032526 | 0.055 | gpm6aa | -0.021 |
| her5 | 0.054 | gap43 | -0.020 |
| spry2 | 0.054 | stxbp1a | -0.020 |
| XLOC-036261 | 0.053 | map1aa | -0.020 |
| si:ch211-67e16.11 | 0.052 | rnasekb | -0.020 |
| mipb | 0.051 | tmem59l | -0.020 |
| en1a | 0.051 | snap25a | -0.020 |
| fgf8a | 0.050 | h2afx1 | -0.020 |
| sox21a | 0.050 | ywhag2 | -0.020 |
| LOC101886985 | 0.049 | hmgb1a | -0.019 |
| mdka | 0.048 | si:dkeyp-75h12.5 | -0.019 |
| irf4a | 0.048 | dpysl3 | -0.019 |
| sdc4 | 0.047 | tuba1a | -0.019 |
| vegfc | 0.047 | marcksl1b | -0.019 |
| cdhr1a | 0.047 | zc4h2 | -0.019 |
| spry4 | 0.046 | hmgb3a | -0.019 |
| pax2a | 0.045 | stmn2a | -0.019 |
| CABZ01079837.1 | 0.044 | myt1b | -0.019 |
| gja8a | 0.044 | myt1a | -0.019 |
| LOC101882642 | 0.043 | zgc:65894 | -0.019 |