| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-003678 | 0.375 | pax6a | -0.030 |
| pax7b | 0.331 | pax6b | -0.027 |
| sox14 | 0.222 | six3b | -0.026 |
| tal1 | 0.206 | fzd5 | -0.025 |
| zfpm2b | 0.190 | six6b | -0.023 |
| emx2 | 0.176 | vsx2 | -0.023 |
| pax3a | 0.173 | hmx4 | -0.022 |
| en2b | 0.163 | wu:fi46h04 | -0.022 |
| tal2 | 0.162 | cadm3 | -0.022 |
| uncx | 0.141 | foxg1b | -0.022 |
| gata3 | 0.140 | shisa2a | -0.021 |
| lhx1a | 0.129 | rrm1 | -0.021 |
| nfixb | 0.128 | zic2b | -0.021 |
| zgc:165461 | 0.126 | zgc:110216 | -0.021 |
| znf296 | 0.125 | XLOC-003718 | -0.021 |
| LOC103909284 | 0.123 | rorb | -0.020 |
| en2a | 0.118 | hmgb2a | -0.020 |
| pou3f2a | 0.115 | lig1 | -0.020 |
| zfpm2a | 0.112 | NC-002333.4 | -0.020 |
| lef1 | 0.107 | prdm1b | -0.019 |
| thbs4b | 0.102 | CABZ01005379.1 | -0.019 |
| nova1 | 0.101 | XLOC-042899 | -0.019 |
| vwde | 0.101 | rrs1 | -0.019 |
| plp1a | 0.101 | si:ch211-114n24.6 | -0.018 |
| col5a1 | 0.099 | six3a | -0.018 |
| gata2a | 0.098 | sox18 | -0.018 |
| uncx4.1 | 0.098 | LOC108180269 | -0.018 |
| fgl1 | 0.096 | stm | -0.017 |
| hapln1a | 0.096 | si:ch211-113a14.24 | -0.017 |
| pmp22a | 0.095 | sfrp1a | -0.017 |
| pou3f3b | 0.094 | anp32e | -0.017 |
| si:ch73-30b17.2 | 0.094 | si:ch211-113a14.18 | -0.017 |
| mxra8b | 0.094 | neurod4 | -0.017 |
| gsx1 | 0.094 | hes2.1 | -0.017 |
| ascl1b | 0.094 | pvalb2 | -0.016 |