| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax6a | 0.558 | syt5b | -0.358 |
| mir181b-3 | 0.393 | crx | -0.351 |
| elavl3 | 0.381 | otx5 | -0.341 |
| slc32a1 | 0.353 | rs1a | -0.295 |
| celf2 | 0.331 | neurod4 | -0.263 |
| rbfox2 | 0.323 | ndrg1b | -0.263 |
| tfap2a | 0.321 | vsx1 | -0.258 |
| prdm13 | 0.321 | ddah2 | -0.244 |
| barhl2 | 0.317 | gnb3a | -0.234 |
| mab21l1 | 0.317 | anp32e | -0.230 |
| si:ch73-290k24.5 | 0.315 | samsn1a | -0.228 |
| tiam1a | 0.297 | atp2b1b | -0.228 |
| stxbp1a | 0.297 | ppdpfa | -0.226 |
| syt1a | 0.294 | stxbp1b | -0.221 |
| pax10 | 0.284 | cplx4a | -0.219 |
| fabp3 | 0.279 | sypb | -0.217 |
| rbfox1 | 0.262 | histh1l | -0.213 |
| hmx4 | 0.261 | neurod1 | -0.207 |
| nhlh2 | 0.255 | hmgb2a | -0.206 |
| stx1b | 0.250 | tulp1a | -0.204 |
| gabrb4 | 0.248 | rcvrn2 | -0.201 |
| carmil2 | 0.246 | vamp1 | -0.200 |
| si:ch211-284f22.3 | 0.243 | LOC103909376 | -0.200 |
| ywhag2 | 0.240 | nrn1lb | -0.200 |
| scrt1a | 0.239 | rbp4l | -0.199 |
| atp1b3a | 0.237 | scg3 | -0.199 |
| zgc:172323 | 0.235 | si:ch73-28h20.1 | -0.198 |
| rtn1b | 0.233 | nexn | -0.197 |
| LOC101886114 | 0.232 | ckmt2a | -0.195 |
| zfhx3 | 0.231 | stx3a | -0.194 |
| grin1a | 0.230 | gngt2a | -0.193 |
| nfasca | 0.230 | tmx3a | -0.192 |
| tfap2b | 0.226 | elovl4b | -0.190 |
| rab3c | 0.226 | arl3l1 | -0.188 |
| rnd1b | 0.225 | gngt2b | -0.186 |