| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otx1 | 0.376 | rpl37 | -0.255 |
| otx2a | 0.370 | rps10 | -0.250 |
| shisa2a | 0.352 | zgc:114188 | -0.241 |
| her5 | 0.347 | rps17 | -0.219 |
| irx7 | 0.336 | nme2b.1 | -0.195 |
| dmbx1a | 0.319 | zgc:56493 | -0.153 |
| si:ch211-152c2.3 | 0.308 | atp5l | -0.148 |
| sfrp1a | 0.303 | eno3 | -0.145 |
| akap12b | 0.300 | zgc:92744 | -0.144 |
| marcksl1b | 0.297 | COX7A2 (1 of many) | -0.143 |
| cyp26c1 | 0.293 | prdx2 | -0.141 |
| cxcr4a | 0.287 | atp5f1b | -0.138 |
| sox32 | 0.287 | atp5mc3b | -0.138 |
| iqca1 | 0.283 | eef1da | -0.137 |
| fscn1a | 0.277 | suclg1 | -0.134 |
| sb:cb81 | 0.272 | atp5if1b | -0.134 |
| sox17 | 0.263 | sod1 | -0.133 |
| gsc | 0.261 | ahcy | -0.133 |
| marcksb | 0.259 | mt-nd1 | -0.131 |
| asph | 0.253 | rpl9 | -0.130 |
| hspb1 | 0.253 | gapdh | -0.129 |
| lima1a | 0.252 | eef1b2 | -0.129 |
| ppig | 0.248 | gstp1 | -0.128 |
| hnrnpa1b | 0.247 | atp5pd | -0.128 |
| flrt3 | 0.245 | mt-atp6 | -0.127 |
| wnt11f2 | 0.245 | atp5fa1 | -0.126 |
| cdh6 | 0.244 | atp5mc1 | -0.124 |
| tbx1 | 0.241 | rplp0 | -0.124 |
| snrnp70 | 0.240 | cox6a1 | -0.124 |
| her11 | 0.240 | zgc:158463 | -0.123 |
| pkdcca | 0.238 | gamt | -0.123 |
| cx43.4 | 0.238 | atp5meb | -0.122 |
| nog1 | 0.237 | rpl19 | -0.121 |
| si:ch211-137a8.4 | 0.237 | rps26l | -0.119 |
| si:dkey-66i24.9 | 0.237 | dap | -0.118 |