nkx3.3 (neural): Daniocell

Daniocell

nkx3.3 (neural)

NK3 homeobox 3 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
nkx2.3	0.278	nova2	-0.024
isl2a	0.085	si:ch211-288g17.3	-0.018
runx3	0.077	si:ch211-222l21.1	-0.017
htr3b	0.077	sox3	-0.015
calhm5.1	0.069	smarce1	-0.014
si:dkeyp-44d3.5	0.065	XLOC-003689	-0.014
BX548247.1	0.063	si:ch211-137a8.4	-0.013
LOC103908849	0.061	khdrbs1a	-0.013
fshb	0.058	marcksl1b	-0.013
LOC100332187	0.057	cirbpb	-0.013
hlx1	0.054	hnrnpa0b	-0.013
wnt9b	0.053	cldn5a	-0.013
BX255963.1	0.051	XLOC-003690	-0.013
lzts2b	0.050	gpm6aa	-0.013
si:dkey-11f4.7	0.049	hmgn2	-0.013
zgc:172131	0.048	gfap	-0.012
CR812832.1	0.048	meis1b	-0.012
LOC103910431	0.048	hmgn3	-0.012
mslnb	0.045	tmpob	-0.012
lft1	0.044	msi1	-0.012
BX901920.1	0.044	srsf2a	-0.012
BNC1	0.044	fabp3	-0.012
XLOC-041870	0.044	hnrnpa0a	-0.012
ifitm1	0.043	nova1	-0.012
ptpn11b	0.043	marcksb	-0.012
ngfra	0.042	uqcrc2a	-0.012
zgc:158257	0.042	smc1al	-0.012
ftr43	0.042	zgc:86598	-0.012
igf2a	0.041	nat8l	-0.012
LOC101882355	0.041	safb	-0.012
LOC101885484	0.041	pbx4	-0.011
phox2a	0.041	her2	-0.011
si:dkey-208k4.3	0.040	sb:cb81	-0.011
tlx2	0.040	ube2e3	-0.011
si:dkey-33c9.6	0.040	hes6	-0.011