| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-003690 | 0.275 | stmn1b | -0.193 |
| mdka | 0.262 | gpm6ab | -0.174 |
| her2 | 0.256 | gng3 | -0.174 |
| XLOC-003689 | 0.242 | rtn1a | -0.169 |
| cldn5a | 0.234 | sncb | -0.169 |
| her15.1 | 0.231 | rtn1b | -0.162 |
| sox19a | 0.224 | elavl3 | -0.158 |
| sox3 | 0.223 | atp6v0cb | -0.157 |
| cd82a | 0.218 | ckbb | -0.154 |
| si:ch211-212k18.5 | 0.218 | elavl4 | -0.152 |
| boc | 0.217 | vamp2 | -0.150 |
| msi1 | 0.216 | stmn2a | -0.146 |
| notch3 | 0.216 | ywhag2 | -0.145 |
| zgc:165461 | 0.215 | stx1b | -0.144 |
| rgmd | 0.214 | zc4h2 | -0.143 |
| id1 | 0.214 | atp6v1e1b | -0.141 |
| sdc4 | 0.211 | stxbp1a | -0.140 |
| fgfr2 | 0.207 | rnasekb | -0.139 |
| zfp36l1a | 0.205 | mllt11 | -0.137 |
| tuba8l | 0.201 | si:dkeyp-75h12.5 | -0.136 |
| lbr | 0.200 | gap43 | -0.136 |
| XLOC-003692 | 0.200 | zgc:65894 | -0.134 |
| sox19b | 0.195 | fez1 | -0.134 |
| dut | 0.194 | snap25a | -0.132 |
| msna | 0.193 | nsg2 | -0.131 |
| gfap | 0.188 | ywhah | -0.131 |
| hmgb2a | 0.186 | tmsb2 | -0.130 |
| angptl4 | 0.182 | gng2 | -0.128 |
| gas1b | 0.181 | csdc2a | -0.128 |
| her4.1 | 0.180 | atp6v1g1 | -0.128 |
| notch1b | 0.178 | calm1a | -0.126 |
| nrarpb | 0.178 | tmem59l | -0.126 |
| pcna | 0.178 | atpv0e2 | -0.125 |
| her9 | 0.175 | dpysl3 | -0.125 |
| ccnd1 | 0.174 | tubb5 | -0.125 |