| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.177 | eef1a1l1 | -0.124 |
| cldnd | 0.150 | hmgb2a | -0.116 |
| gtf2a1 | 0.143 | NC-002333.4 | -0.113 |
| ccna1 | 0.142 | rplp1 | -0.111 |
| spink2.1 | 0.139 | ybx1 | -0.107 |
| h1m | 0.134 | hspb1 | -0.096 |
| npc2 | 0.133 | ptmab | -0.095 |
| zgc:173742 | 0.132 | rpl7a | -0.095 |
| mkrn4 | 0.131 | si:ch73-1a9.3 | -0.095 |
| si:dkey-68o6.5 | 0.131 | polr3gla | -0.094 |
| lamp2 | 0.130 | si:ch211-152c2.3 | -0.094 |
| snx27a | 0.129 | hmgn6 | -0.093 |
| thoc2 | 0.126 | rps7 | -0.091 |
| stk35l | 0.125 | si:ch211-222l21.1 | -0.090 |
| h2af1al | 0.125 | rpl7 | -0.088 |
| dnajc1 | 0.125 | ncl | -0.087 |
| tent4b | 0.124 | npm1a | -0.086 |
| rcor1 | 0.124 | hnrnpa0b | -0.085 |
| acp5a | 0.124 | rps6 | -0.085 |
| rbm7 | 0.124 | rplp0 | -0.084 |
| zgc:113424 | 0.123 | rpl11 | -0.084 |
| blf | 0.122 | add3b | -0.083 |
| ccnb2 | 0.121 | si:ch211-137a8.4 | -0.080 |
| ddx3xa | 0.121 | hmgn2 | -0.079 |
| epcam | 0.121 | aldob | -0.078 |
| arfip1 | 0.120 | rps3a | -0.077 |
| ehmt1b | 0.120 | rps15a | -0.077 |
| ttc13 | 0.120 | sox2 | -0.077 |
| zgc:100951 | 0.118 | rps19 | -0.076 |
| exd2 | 0.115 | crabp2b | -0.075 |
| tsc1a | 0.115 | alcamb | -0.073 |
| hdgfl2 | 0.115 | rpl10a | -0.073 |
| slc25a25a | 0.114 | dynll1 | -0.073 |
| gdf3 | 0.114 | si:ch211-262h13.3 | -0.069 |
| tent5c | 0.113 | mt-co2 | -0.069 |