| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| myl9a | 0.470 | ptmab | -0.128 |
| slit1b | 0.466 | ptmaa | -0.110 |
| col9a3 | 0.461 | hnrnpaba | -0.102 |
| ctgfa | 0.460 | hmgb1b | -0.099 |
| clu | 0.449 | elavl3 | -0.095 |
| shhb | 0.447 | khdrbs1a | -0.089 |
| npr3 | 0.414 | marcksb | -0.088 |
| trabd2b | 0.410 | tubb2b | -0.084 |
| spon1b | 0.407 | cirbpa | -0.082 |
| arxa | 0.401 | apex1 | -0.080 |
| col8a1a | 0.400 | cirbpb | -0.079 |
| cyr61l2 | 0.399 | snrpd1 | -0.078 |
| BX908782.3 | 0.398 | hmgb3a | -0.078 |
| shha | 0.389 | si:ch211-288g17.3 | -0.078 |
| r3hdml | 0.383 | ddx39ab | -0.078 |
| optc | 0.383 | hmgb2b | -0.077 |
| aplnr2 | 0.363 | seta | -0.076 |
| sulf1 | 0.363 | si:ch211-137a8.4 | -0.076 |
| fxyd1 | 0.357 | sox11b | -0.073 |
| spon2a | 0.354 | hnrnpa0b | -0.073 |
| col9a2 | 0.352 | setb | -0.073 |
| col2a1b | 0.347 | myt1b | -0.071 |
| ntn1b | 0.345 | hdac1 | -0.071 |
| ptgs2a | 0.344 | snrpf | -0.071 |
| slit2 | 0.344 | hmgn2 | -0.071 |
| scospondin | 0.336 | hsp90ab1 | -0.070 |
| scinlb | 0.333 | tmsb | -0.070 |
| loxl5b | 0.330 | si:dkey-276j7.1 | -0.070 |
| vasna | 0.329 | h3f3a | -0.069 |
| foxa1 | 0.326 | sb:cb81 | -0.068 |
| col2a1a | 0.325 | syncrip | -0.068 |
| col9a1b | 0.322 | rtn1a | -0.068 |
| spon1a | 0.318 | h2afvb | -0.068 |
| wnt4b | 0.314 | h3f3d | -0.067 |
| b3gnt7l | 0.312 | hnrnpa0l | -0.067 |