| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dmrt3a | 0.357 | msna | -0.104 |
| pax2a | 0.269 | id1 | -0.098 |
| slc32a1 | 0.237 | si:ch73-281n10.2 | -0.087 |
| slc30a2 | 0.226 | fosab | -0.085 |
| nkx1.2lb | 0.222 | hmgb2a | -0.085 |
| pax8 | 0.214 | cd81a | -0.084 |
| slc6a5 | 0.204 | vamp3 | -0.081 |
| scrt1a | 0.203 | tuba8l4 | -0.079 |
| pax2b | 0.203 | dut | -0.077 |
| lhx1a | 0.198 | sdc4 | -0.077 |
| lhx5 | 0.193 | stmn1a | -0.077 |
| cacna2d3 | 0.191 | XLOC-003690 | -0.077 |
| nsg2 | 0.187 | jun | -0.076 |
| tfap2b | 0.181 | selenoh | -0.076 |
| scrt2 | 0.181 | si:ch73-265d7.2 | -0.076 |
| klhl14 | 0.179 | cldn5a | -0.076 |
| uncx4.1 | 0.175 | pcna | -0.075 |
| myt1b | 0.175 | cd82a | -0.073 |
| hoxb9a | 0.172 | tuba8l | -0.072 |
| tfap2e | 0.171 | qkia | -0.070 |
| drgx | 0.171 | metrnla | -0.070 |
| nrxn1a | 0.168 | rpa3 | -0.069 |
| dmrt2a | 0.166 | fabp7a | -0.069 |
| jagn1a | 0.162 | ccng1 | -0.069 |
| stxbp1a | 0.160 | lbr | -0.068 |
| znf385c | 0.157 | anp32b | -0.067 |
| plxna4 | 0.157 | zgc:55461 | -0.067 |
| hoxb8a | 0.156 | tubb4b | -0.066 |
| tmeff1b | 0.155 | nutf2l | -0.066 |
| uncx | 0.155 | ptch2 | -0.065 |
| elavl3 | 0.154 | chaf1a | -0.065 |
| wt1a | 0.152 | rrm1 | -0.065 |
| pth1rb | 0.152 | banf1 | -0.065 |
| XLOC-005615 | 0.151 | COX7A2 (1 of many) | -0.065 |
| nrxn3a | 0.151 | ldlrad2 | -0.065 |