Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-132g1.1 | 0.153 | col2a1b | -0.015 |
| CT956066.1 | 0.152 | tgfbi | -0.014 |
| F7 (1 of many) | 0.143 | sult6b1 | -0.014 |
| XLOC-025509 | 0.143 | col2a1a | -0.014 |
| XLOC-025418 | 0.119 | CU929237.1 | -0.013 |
| LOC100005689 | 0.112 | col9a2 | -0.013 |
| LOC108179151 | 0.091 | LO018188.1 | -0.013 |
| rorc | 0.084 | cnmd | -0.013 |
| slc25a29b | 0.080 | foxc1b | -0.013 |
| sod3a | 0.073 | twist2 | -0.013 |
| XLOC-012502 | 0.071 | faua | -0.013 |
| FQ377991.1 | 0.070 | col9a1a | -0.013 |
| si:dkey-183p4.10 | 0.068 | fibina | -0.012 |
| LOC101884529 | 0.068 | col9a3 | -0.012 |
| grid2ipa | 0.066 | gsc | -0.012 |
| LOC103910948 | 0.065 | six1a | -0.012 |
| cd4-1 | 0.064 | ciarta | -0.011 |
| rag1 | 0.064 | ctgfb | -0.011 |
| CU929037.1 | 0.064 | fgfbp2b | -0.011 |
| CR932364.1 | 0.064 | dlx5a | -0.011 |
| pax4 | 0.063 | vwde | -0.011 |
| angptl6 | 0.062 | cthrc1a | -0.011 |
| si:ch1073-220m6.1 | 0.062 | meox1 | -0.011 |
| ccr9b | 0.060 | gulp1a | -0.011 |
| cracr2b | 0.060 | wfdc2 | -0.011 |
| fbn2a.1 | 0.058 | VIT | -0.011 |
| XLOC-003396 | 0.058 | sema3bl | -0.011 |
| lck | 0.058 | matn4 | -0.011 |
| hdhd5 | 0.057 | actc1b | -0.011 |
| XLOC-015407 | 0.056 | mylz3 | -0.011 |
| LOC101887118 | 0.056 | sod1 | -0.010 |
| CR626935.1 | 0.055 | ecrg4a | -0.010 |
| pdzk1ip1 | 0.055 | sparc | -0.010 |
| muc13a | 0.054 | rgs5a | -0.010 |
| AL935115.1 | 0.054 | col11a2 | -0.010 |