Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| foxf1 | 0.194 | cthrc1a | -0.045 |
| foxf2a | 0.193 | cnmd | -0.042 |
| foxq1a | 0.146 | fabp3 | -0.040 |
| foxf2b | 0.132 | matn4 | -0.039 |
| si:ch211-106h4.12 | 0.126 | cdon | -0.039 |
| col6a4a | 0.116 | tnn | -0.038 |
| col6a2 | 0.108 | akap12b | -0.037 |
| foxl1 | 0.107 | gas1a | -0.036 |
| efna2a | 0.106 | mdka | -0.035 |
| col6a1 | 0.105 | postnb | -0.035 |
| hhip | 0.102 | col9a1a | -0.034 |
| tcf21 | 0.101 | col12a1a | -0.034 |
| dpt | 0.095 | col9a2 | -0.034 |
| meox2b | 0.093 | boc | -0.033 |
| shox2 | 0.093 | fxyd1 | -0.032 |
| pbx1b | 0.090 | zfhx4 | -0.031 |
| bmp16 | 0.089 | twist1a | -0.031 |
| foxq1b | 0.088 | col2a1a | -0.030 |
| tspan9a | 0.083 | col9a3 | -0.029 |
| entpd1 | 0.083 | sox9a | -0.029 |
| scube2 | 0.082 | cxcl18b | -0.028 |
| ptch2 | 0.080 | col11a2 | -0.028 |
| meis2b | 0.080 | lin28a | -0.028 |
| ociad2 | 0.077 | foxc1a | -0.028 |
| zgc:195173 | 0.076 | si:ch211-251b21.1 | -0.028 |
| ifitm1 | 0.075 | emilin1a | -0.028 |
| barx1 | 0.075 | ca6 | -0.027 |
| ngfb | 0.074 | tgfbi | -0.027 |
| hoxd4a | 0.073 | thbs1b | -0.027 |
| col6a3 | 0.073 | col2a1b | -0.027 |
| mamdc2b | 0.071 | fstl1a | -0.027 |
| plpp1a | 0.071 | VIT | -0.026 |
| ptch1 | 0.070 | msx1b | -0.025 |
| BX088707.3 | 0.069 | marcksl1b | -0.025 |
| LOC110439904 | 0.069 | kitlga | -0.025 |