Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| foxf1 | 0.268 | fabp3 | -0.031 |
| foxf2a | 0.261 | si:ch211-137a8.4 | -0.025 |
| si:ch211-62a1.3 | 0.253 | her15.1 | -0.024 |
| mylkb | 0.248 | XLOC-003690 | -0.023 |
| trpc6a | 0.220 | XLOC-003689 | -0.022 |
| acta2 | 0.218 | hmgb3b | -0.021 |
| tagln | 0.199 | nova2 | -0.021 |
| myh11a | 0.196 | sox3 | -0.021 |
| csrp1b | 0.195 | XLOC-003692 | -0.021 |
| BX088707.3 | 0.186 | cldn5a | -0.020 |
| col6a2 | 0.183 | her12 | -0.019 |
| lmod1b | 0.182 | msi1 | -0.019 |
| col6a1 | 0.177 | tuba1a | -0.019 |
| foxl1 | 0.173 | dla | -0.018 |
| desmb | 0.168 | hes6 | -0.018 |
| foxf2b | 0.168 | abhd6a | -0.018 |
| smtna | 0.168 | her4.2 | -0.018 |
| myl9a | 0.163 | apex1 | -0.017 |
| tcf21 | 0.155 | her2 | -0.017 |
| cnn1b | 0.154 | her4.1 | -0.017 |
| myocd | 0.154 | notch1a | -0.017 |
| XLOC-041870 | 0.151 | CABZ01075068.1 | -0.016 |
| angptl5 | 0.149 | epcam | -0.016 |
| mamdc2a | 0.140 | lfng | -0.016 |
| ifitm1 | 0.138 | marcksb | -0.016 |
| aoc2 | 0.136 | si:ch73-21g5.7 | -0.016 |
| col6a4a | 0.131 | sox19a | -0.016 |
| gucy1a1 | 0.130 | cfl1l | -0.015 |
| nkx3.3 | 0.130 | gfap | -0.015 |
| nkx2.3 | 0.127 | krt4 | -0.015 |
| bmp16 | 0.126 | LOC798783 | -0.015 |
| ntn5 | 0.125 | notch1b | -0.015 |
| BX323087.1 | 0.123 | nrarpb | -0.015 |
| si:dkeyp-66d1.7 | 0.121 | rcor2 | -0.015 |
| XLOC-002639 | 0.119 | sb:cb81 | -0.015 |