Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| soga3 | 0.713 | mt-co2 | -0.075 |
| BX510960.2 | 0.651 | hspa8 | -0.071 |
| grin3a | 0.617 | ppiab | -0.069 |
| hoxc9a | 0.470 | rplp0 | -0.064 |
| CU655845.1 | 0.463 | rps9 | -0.063 |
| kif26aa | 0.415 | cirbpb | -0.059 |
| LOC100004016 | 0.376 | rps15a | -0.059 |
| LOC101882472 | 0.358 | COX5B | -0.051 |
| mocs3 | 0.356 | mt-nd1 | -0.051 |
| si:ch73-208h1.1 | 0.352 | cox8a | -0.050 |
| scrt1a | 0.352 | zgc:114188 | -0.049 |
| hoxb9a | 0.352 | dynll1 | -0.048 |
| itpripl2 | 0.333 | rpl36 | -0.048 |
| mhc1lga | 0.332 | mt-atp6 | -0.048 |
| si:dkey-171c9.3 | 0.331 | mt-cyb | -0.047 |
| si:ch73-266f23.1 | 0.315 | vdac2 | -0.047 |
| pax2a | 0.302 | cox6a1 | -0.047 |
| treh | 0.292 | ran | -0.046 |
| letmd1 | 0.289 | epcam | -0.046 |
| sema4e | 0.284 | rpl5a | -0.046 |
| efcc1 | 0.277 | ubc | -0.046 |
| si:ch211-154c21.1 | 0.272 | rps3a | -0.045 |
| rab9a | 0.266 | rplp2 | -0.044 |
| arsh | 0.261 | ywhabl | -0.044 |
| LOC100333474 | 0.260 | rps6 | -0.044 |
| hoxb8a | 0.239 | fkbp1aa | -0.043 |
| asah2 | 0.238 | rpl23a | -0.042 |
| BX530077.1 | 0.235 | atp5mc3b | -0.040 |
| rnf151 | 0.234 | atp5mc1 | -0.039 |
| ice1 | 0.225 | atp5pd | -0.039 |
| hapln1a | 0.218 | csnk1a1 | -0.039 |
| smad3b | 0.214 | actb1 | -0.038 |
| usp25 | 0.212 | zgc:153867 | -0.038 |
| neurl4 | 0.208 | oaz1a | -0.038 |
| CABZ01079663.1 | 0.207 | prdx2 | -0.038 |