Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| aqp3a | 0.146 | snrpd1 | -0.094 |
| cotl1 | 0.137 | ptges3b | -0.091 |
| sparc | 0.136 | ddx39ab | -0.090 |
| col1a2 | 0.135 | apex1 | -0.089 |
| col4a5 | 0.134 | snrpe | -0.089 |
| cldn1 | 0.134 | hmgb2b | -0.088 |
| col1a1b | 0.132 | snrpd2 | -0.088 |
| col4a6 | 0.128 | khdrbs1a | -0.088 |
| pfn1 | 0.128 | cfl1 | -0.087 |
| col1a1a | 0.126 | snrpb | -0.086 |
| col11a1a | 0.126 | snrpf | -0.086 |
| tmsb1 | 0.121 | snrpg | -0.086 |
| s100a10b | 0.119 | hmga1a | -0.085 |
| rac2 | 0.118 | h2afva | -0.085 |
| igfbp7 | 0.117 | rbm8a | -0.085 |
| postnb | 0.116 | cx43.4 | -0.083 |
| si:dkey-102c8.3 | 0.115 | anp32b | -0.082 |
| krt91 | 0.115 | marcksb | -0.082 |
| lamb4 | 0.115 | h3f3a | -0.082 |
| capns1a | 0.115 | sumo3b | -0.082 |
| itgb4 | 0.114 | snu13b | -0.080 |
| epgn | 0.113 | h2afvb | -0.080 |
| si:dkey-16p21.8 | 0.112 | hnrnpabb | -0.079 |
| cldni | 0.112 | lin28a | -0.079 |
| col2a1b | 0.112 | hspb1 | -0.079 |
| anxa1a | 0.111 | hmgn6 | -0.078 |
| col14a1b | 0.111 | srsf3b | -0.078 |
| gapdhs | 0.111 | phf5a | -0.078 |
| krt5 | 0.111 | nucks1a | -0.077 |
| hcls1 | 0.111 | snrpc | -0.077 |
| si:rp71-77l1.1 | 0.110 | hnrnpa1b | -0.076 |
| cfl1l | 0.109 | ilf2 | -0.076 |
| itgav | 0.109 | tmeff1b | -0.076 |
| itgb1b.1 | 0.108 | ilf3b | -0.076 |
| tmsb4x | 0.108 | anp32e | -0.076 |