Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX957256.1 | 0.408 | pabpc1a | -0.066 |
| h2af1al | 0.402 | rpl6 | -0.065 |
| c3b.2 | 0.370 | si:ch211-222l21.1 | -0.058 |
| clrn3 | 0.320 | h2afvb | -0.057 |
| tymp | 0.295 | hmgn7 | -0.054 |
| her7 | 0.287 | foxp4 | -0.053 |
| CR391944.1 | 0.282 | id1 | -0.053 |
| rdh5 | 0.282 | hmga1a | -0.051 |
| m17 | 0.282 | zgc:193541 | -0.050 |
| si:ch211-261n11.8 | 0.281 | nucks1a | -0.050 |
| mhc1lda | 0.278 | tubb2b | -0.049 |
| mhc1zca | 0.276 | rpl32 | -0.049 |
| rxfp2a | 0.257 | cct2 | -0.048 |
| si:dkeyp-34c12.1 | 0.255 | vdac3 | -0.047 |
| CABZ01084566.1 | 0.242 | six1b | -0.046 |
| slc4a5b | 0.239 | nanos1 | -0.046 |
| st3gal7 | 0.236 | hmgb1b | -0.045 |
| pm20d1.1 | 0.233 | col11a1a | -0.045 |
| si:dkey-26m3.3 | 0.222 | otomp | -0.044 |
| morc3b | 0.220 | aif1l | -0.044 |
| si:ch211-244b2.3 | 0.218 | pabpn1 | -0.043 |
| si:ch73-261i21.5 | 0.217 | sumo2b | -0.043 |
| LOC100537272 | 0.216 | fkbp3 | -0.043 |
| ushbp1 | 0.216 | tbx2b | -0.043 |
| CABZ01100278.1 | 0.210 | si:ch211-288g17.3 | -0.043 |
| abcb11b | 0.207 | col9a2 | -0.043 |
| cyp7a1 | 0.205 | ube2ib | -0.042 |
| zmp:0000000606 | 0.195 | sub1a | -0.042 |
| birc7 | 0.189 | cd81a | -0.042 |
| kcnh2a | 0.186 | cldna | -0.041 |
| lrrc58a | 0.185 | nfyba | -0.041 |
| zgc:171501 | 0.184 | rbx1 | -0.041 |
| fndc7rs2 | 0.183 | h2afva | -0.041 |
| cxcr3.2 | 0.179 | ppiaa | -0.040 |
| apodb | 0.178 | si:dkey-98f17.3 | -0.040 |