Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lama3 | 0.597 | mt-cyb | -0.031 |
| si:ch211-199g17.9 | 0.389 | si:ch73-1a9.3 | -0.028 |
| AL928685.1 | 0.355 | h2afvb | -0.027 |
| AL935186.1 | 0.278 | mt-atp6 | -0.026 |
| znf977 | 0.249 | mt-nd4 | -0.024 |
| si:dkey-14d8.6 | 0.194 | hnrnpaba | -0.024 |
| nrm | 0.179 | idh2 | -0.023 |
| si:dkey-201i6.8 | 0.170 | dad1 | -0.023 |
| lhx8a | 0.165 | hmgn6 | -0.022 |
| LOC110439449 | 0.163 | col5a1 | -0.022 |
| BX927122.1 | 0.161 | bhmt | -0.021 |
| ADGRL3 | 0.161 | atp5f1b | -0.021 |
| cryba2b | 0.160 | copz1 | -0.021 |
| XLOC-010731 | 0.158 | psma3 | -0.020 |
| LOC108181455 | 0.152 | hbbe1.3 | -0.020 |
| limk1a | 0.152 | snrpd2 | -0.020 |
| CU639468.1 | 0.150 | tma7 | -0.020 |
| zgc:91944 | 0.147 | atp5pb | -0.020 |
| rnf217 | 0.147 | mif | -0.020 |
| si:ch211-116o3.6 | 0.141 | CABZ01072614.1 | -0.020 |
| LOC101885337 | 0.139 | selenof | -0.019 |
| CR559945.2 | 0.138 | fabp3 | -0.019 |
| hps5 | 0.128 | srsf3b | -0.019 |
| zgc:175280 | 0.127 | hnrnpabb | -0.019 |
| wu:fi09b08 | 0.123 | pmp22a | -0.019 |
| rgs4 | 0.118 | cope | -0.019 |
| kbtbd13 | 0.117 | pdcd6 | -0.019 |
| CR354402.1 | 0.117 | rbx1 | -0.019 |
| c19h1orf109 | 0.117 | mrpl33 | -0.019 |
| BX119963.1 | 0.116 | sec11a | -0.019 |
| znf710a | 0.113 | gapdhs | -0.019 |
| faima | 0.113 | ctnnb1 | -0.019 |
| acod1 | 0.113 | arf2b | -0.019 |
| stxbp5b | 0.112 | atp5f1d | -0.019 |
| LOC100538052 | 0.111 | dpy30 | -0.019 |