| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CU138542.2 | 0.154 | NC-002333.4 | -0.119 |
| asb11 | 0.112 | cdx4 | -0.079 |
| inka1a | 0.103 | tbxta | -0.079 |
| glulb | 0.102 | eve1 | -0.077 |
| ctsla | 0.099 | wu:fb97g03 | -0.072 |
| cited4b | 0.095 | wnt11f2 | -0.063 |
| sox3 | 0.095 | zgc:110425 | -0.060 |
| si:ch211-173m16.2 | 0.093 | hes6 | -0.059 |
| ccnd1 | 0.090 | efnb2b | -0.057 |
| cirbpb | 0.088 | BX927327.1 | -0.056 |
| gpd1b | 0.087 | serpinh1b | -0.056 |
| mych | 0.083 | lhx1a | -0.055 |
| si:dkey-22h13.5 | 0.083 | sp5a | -0.052 |
| zic2b | 0.083 | tpbga | -0.052 |
| srsf5a | 0.082 | gata5 | -0.051 |
| blf | 0.082 | wnt5b | -0.049 |
| metrnla | 0.082 | dkk1b | -0.049 |
| stk35l | 0.080 | prickle1a | -0.048 |
| cxcr4a | 0.080 | aplnrb | -0.048 |
| zgc:56676 | 0.078 | p4ha2 | -0.048 |
| ubc | 0.078 | foxa | -0.047 |
| LOC101885477 | 0.078 | ism1 | -0.046 |
| srsf1a | 0.077 | zic2a | -0.046 |
| BX957251.1 | 0.077 | plekhg5b | -0.046 |
| aldob | 0.077 | gata6 | -0.045 |
| rcc1 | 0.076 | mespab | -0.044 |
| eef2b | 0.076 | lmo4a | -0.044 |
| nanog | 0.076 | rasgef1ba | -0.043 |
| LOC110438541 | 0.075 | si:dkeyp-2e4.3 | -0.043 |
| mex3b | 0.074 | sebox | -0.042 |
| foxd5 | 0.074 | mespaa | -0.042 |
| snai2 | 0.073 | msx1b | -0.042 |
| psme3 | 0.072 | tsku | -0.042 |
| ddx5 | 0.072 | pitx2 | -0.041 |
| ccng1 | 0.071 | zgc:110216 | -0.041 |