| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16 | 0.315 | pkdccb | -0.129 |
| tbxta | 0.249 | sox3 | -0.129 |
| wnt11f2 | 0.240 | her3 | -0.112 |
| akap12b | 0.230 | cxcr4b | -0.099 |
| fscn1a | 0.223 | hirip3 | -0.098 |
| si:dkeyp-2e4.3 | 0.222 | pim3 | -0.091 |
| lhx1a | 0.209 | si:ch73-141c7.1 | -0.089 |
| osr1 | 0.207 | sox19a | -0.088 |
| fgf8a | 0.207 | cited4b | -0.086 |
| wu:fb97g03 | 0.198 | si:ch211-170d8.2 | -0.082 |
| hes6 | 0.194 | ska2 | -0.082 |
| cyp27c1 | 0.194 | pik3r3b | -0.081 |
| sebox | 0.189 | pfkfb4b | -0.081 |
| gata5 | 0.188 | slc25a25a | -0.080 |
| mespab | 0.188 | sox2 | -0.079 |
| FP102169.1 | 0.187 | fbxo32 | -0.076 |
| foxa | 0.186 | golga1 | -0.074 |
| notum1a | 0.179 | sox19b | -0.074 |
| dkk1b | 0.178 | btg4 | -0.074 |
| ndr2 | 0.178 | zgc:162879 | -0.074 |
| BX927327.1 | 0.177 | myclb | -0.073 |
| trib3 | 0.175 | NC-002333.4 | -0.073 |
| pitx2 | 0.174 | prdm14 | -0.073 |
| hnrnpub | 0.172 | fam114a2 | -0.073 |
| ddit4 | 0.171 | CABZ01069022.2 | -0.073 |
| lft1 | 0.170 | fbxo45 | -0.072 |
| vent | 0.169 | zgc:113424 | -0.071 |
| morc3b | 0.165 | si:ch211-147a11.3 | -0.071 |
| ctcf | 0.164 | zcchc2 | -0.070 |
| drl | 0.163 | midn | -0.070 |
| vrtn | 0.161 | bmp15 | -0.070 |
| stm | 0.161 | rnf128a | -0.070 |
| dusp4 | 0.159 | mid1ip1l | -0.070 |
| tpbga | 0.159 | hesx1 | -0.069 |
| eve1 | 0.159 | yipf1 | -0.069 |