| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbxta | 0.283 | sox3 | -0.230 |
| lhx1a | 0.282 | cxcr4b | -0.178 |
| fgf8a | 0.279 | id1 | -0.157 |
| wnt11f2 | 0.270 | sox19a | -0.146 |
| osr1 | 0.265 | cited4b | -0.124 |
| pitx2 | 0.261 | inka1a | -0.115 |
| sebox | 0.260 | asb11 | -0.114 |
| gata5 | 0.255 | zic2b | -0.111 |
| dkk1b | 0.252 | foxd5 | -0.105 |
| FP102169.1 | 0.248 | cxcr4a | -0.105 |
| mespab | 0.239 | shisa2a | -0.098 |
| lft1 | 0.237 | si:ch1073-80i24.3 | -0.092 |
| ndr2 | 0.232 | sox2 | -0.091 |
| trib3 | 0.228 | sb:cb81 | -0.087 |
| BX927327.1 | 0.226 | pfkfb4b | -0.078 |
| sp5a | 0.214 | gpd1b | -0.074 |
| foxa | 0.214 | foxd3 | -0.070 |
| fscn1a | 0.209 | aldob | -0.066 |
| aplnrb | 0.206 | si:ch211-170d8.2 | -0.066 |
| notum1a | 0.205 | gadd45ga | -0.064 |
| dusp4 | 0.202 | foxh1 | -0.064 |
| cyp27c1 | 0.202 | sfrp1a | -0.063 |
| lft2 | 0.200 | stmn1a | -0.063 |
| fgf3 | 0.198 | zgc:64022 | -0.062 |
| zic2a | 0.197 | her3 | -0.060 |
| gata6 | 0.195 | nasp | -0.058 |
| eve1 | 0.192 | lfng | -0.058 |
| flrt3 | 0.190 | tsc22d2 | -0.055 |
| wnt5b | 0.188 | alcamb | -0.054 |
| hes6 | 0.187 | her8a | -0.053 |
| aldh1a2 | 0.187 | pkdccb | -0.053 |
| wu:fb97g03 | 0.184 | si:rp71-45k5.2 | -0.053 |
| tbx16 | 0.182 | admp | -0.052 |
| ndr1 | 0.179 | prdm14 | -0.051 |
| fgf17 | 0.176 | snai2 | -0.051 |