Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc18a3a | 0.144 | XLOC-003690 | -0.071 |
| chodl | 0.143 | id1 | -0.067 |
| XLOC-036173 | 0.142 | mdka | -0.061 |
| SLC35D3 | 0.140 | btg2 | -0.058 |
| si:ch211-247j9.1 | 0.139 | sparc | -0.057 |
| mnx1 | 0.134 | her15.1 | -0.057 |
| ache | 0.134 | sox3 | -0.057 |
| tac1 | 0.132 | vamp3 | -0.054 |
| cplx2l | 0.128 | tspan7 | -0.054 |
| sv2c | 0.127 | notch3 | -0.052 |
| rbfox1 | 0.126 | cldn5a | -0.052 |
| chga | 0.125 | sdc4 | -0.052 |
| si:ch211-113g11.6 | 0.124 | her4.2 | -0.052 |
| stmn3 | 0.121 | XLOC-003689 | -0.052 |
| si:dkey-85n7.6 | 0.116 | gpm6bb | -0.051 |
| chata | 0.115 | hmgb2a | -0.051 |
| sema3c | 0.113 | XLOC-003692 | -0.050 |
| rbfox3a | 0.112 | cd82a | -0.050 |
| slc5a7a | 0.111 | fabp7a | -0.049 |
| gfra1b | 0.108 | COX7A2 (1 of many) | -0.049 |
| syt2a | 0.107 | sox19a | -0.049 |
| lhx4 | 0.107 | msna | -0.048 |
| XLOC-016165 | 0.106 | cd63 | -0.048 |
| LOC100537369 | 0.106 | msi1 | -0.047 |
| onecut3a | 0.106 | atp1a1b | -0.047 |
| kcnc3a | 0.105 | pgrmc1 | -0.047 |
| nefmb | 0.105 | rps20 | -0.046 |
| gjd1a | 0.105 | lfng | -0.046 |
| pcsk1nl | 0.104 | si:dkey-151g10.6 | -0.045 |
| tecrl2a | 0.104 | si:ch211-286b5.5 | -0.045 |
| cntn2 | 0.103 | her4.1 | -0.045 |
| syt12 | 0.102 | her12 | -0.045 |
| ywhag2 | 0.102 | rplp1 | -0.044 |
| si:dkey-178k16.1 | 0.102 | rpl39 | -0.043 |
| CABZ01074363.1 | 0.101 | qki2 | -0.043 |