| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| isl2a | 0.451 | XLOC-003690 | -0.177 |
| islr2 | 0.403 | her15.1 | -0.172 |
| si:ch211-247j9.1 | 0.379 | actb2 | -0.166 |
| isl1 | 0.368 | id1 | -0.165 |
| sox4a | 0.346 | mdka | -0.165 |
| pik3r3b | 0.313 | slc25a3b | -0.152 |
| cntn2 | 0.306 | zgc:56493 | -0.151 |
| nanos1 | 0.297 | cldn5a | -0.148 |
| fndc5a | 0.293 | XLOC-003689 | -0.147 |
| ret | 0.287 | hmgb2a | -0.146 |
| onecut1 | 0.269 | sox3 | -0.144 |
| mnx1 | 0.269 | tspan7 | -0.134 |
| hunk | 0.265 | notch3 | -0.133 |
| slc18a3a | 0.259 | btg2 | -0.130 |
| gfra3 | 0.257 | eef1a1l1 | -0.130 |
| elavl4 | 0.246 | XLOC-003692 | -0.127 |
| tmsb | 0.242 | ppib | -0.126 |
| xpr1a | 0.241 | her4.2 | -0.126 |
| tac1 | 0.241 | eef1b2 | -0.123 |
| LOC100537384 | 0.238 | vamp3 | -0.123 |
| XLOC-007078 | 0.228 | msi1 | -0.123 |
| LOC100537369 | 0.228 | actb1 | -0.121 |
| pou2f2a | 0.228 | sdc4 | -0.121 |
| adam19b | 0.227 | atp5mc3b | -0.119 |
| alcamb | 0.223 | her4.1 | -0.118 |
| kif26bb | 0.223 | COX7A2 (1 of many) | -0.118 |
| stmn1b | 0.221 | her12 | -0.116 |
| plxna4 | 0.219 | sox19a | -0.116 |
| FO082781.1 | 0.218 | msna | -0.116 |
| nr2f2 | 0.216 | snrpf | -0.115 |
| CR847968.1 | 0.215 | cox6b2 | -0.113 |
| kcns3a | 0.212 | rpl22l1 | -0.113 |
| nr2f1a | 0.211 | si:ch73-281n10.2 | -0.113 |
| olfm1b | 0.209 | sb:cb81 | -0.112 |
| znf704 | 0.207 | psmb7 | -0.112 |