| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf8a | 0.201 | ptmaa | -0.120 |
| pax5 | 0.194 | rtn1a | -0.106 |
| cnpy1 | 0.186 | tuba1c | -0.102 |
| fgf8b | 0.168 | stmn1b | -0.098 |
| en2a | 0.167 | elavl3 | -0.096 |
| ism1 | 0.167 | gpm6aa | -0.094 |
| en2b | 0.143 | ckbb | -0.091 |
| en1a | 0.138 | gpm6ab | -0.086 |
| spry2 | 0.127 | tmsb4x | -0.085 |
| en1b | 0.126 | gng3 | -0.084 |
| slf1 | 0.126 | tmsb | -0.079 |
| hspb1 | 0.124 | sncb | -0.078 |
| etv4 | 0.118 | atp6v0cb | -0.078 |
| spry4 | 0.117 | rnasekb | -0.077 |
| etv5b | 0.114 | rtn1b | -0.076 |
| fgf3 | 0.111 | tubb5 | -0.075 |
| nop58 | 0.110 | vamp2 | -0.073 |
| sdc4 | 0.110 | fez1 | -0.072 |
| npm1a | 0.109 | si:dkey-276j7.1 | -0.070 |
| zcchc7 | 0.108 | elavl4 | -0.070 |
| apela | 0.108 | gng2 | -0.070 |
| cdx4 | 0.105 | stx1b | -0.069 |
| fbl | 0.105 | atp6v1e1b | -0.069 |
| lig1 | 0.105 | si:dkeyp-75h12.5 | -0.068 |
| dkc1 | 0.105 | ywhag2 | -0.068 |
| XLOC-032526 | 0.104 | hmgb3a | -0.068 |
| akap12b | 0.104 | myt1b | -0.067 |
| id1 | 0.104 | gap43 | -0.067 |
| nop56 | 0.104 | stmn2a | -0.067 |
| chaf1a | 0.103 | h3f3c | -0.067 |
| tbxta | 0.099 | jpt1b | -0.067 |
| nop2 | 0.098 | mllt11 | -0.067 |
| sp8b | 0.098 | dpysl3 | -0.066 |
| nhp2 | 0.098 | atp6v1g1 | -0.066 |
| rsl1d1 | 0.097 | nr2f1a | -0.066 |