| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.099 | NC-002333.4 | -0.115 |
| cldnd | 0.097 | hspb1 | -0.051 |
| ccnb2 | 0.095 | hmgb2a | -0.051 |
| rbm7 | 0.092 | si:ch73-1a9.3 | -0.051 |
| acp5a | 0.090 | akap12b | -0.050 |
| gdf3 | 0.086 | ptmab | -0.050 |
| abhd10b | 0.086 | apoc1 | -0.049 |
| ccna2 | 0.085 | hmgn6 | -0.046 |
| cited4b | 0.084 | eef1a1l1 | -0.045 |
| inka1a | 0.084 | si:ch211-222l21.1 | -0.043 |
| si:dkey-256h2.1 | 0.084 | tbxta | -0.043 |
| lamp2 | 0.084 | zgc:110425 | -0.042 |
| chmp4c | 0.083 | dynll1 | -0.042 |
| zgc:100951 | 0.082 | marcksl1b | -0.042 |
| cdca7a | 0.081 | hmgn2 | -0.041 |
| npc2 | 0.081 | rpl11 | -0.041 |
| lman1 | 0.081 | si:ch211-113a14.18 | -0.040 |
| spink2.1 | 0.080 | rpsa | -0.040 |
| mapre1a | 0.080 | rpl13a | -0.039 |
| dbr1 | 0.079 | hes6 | -0.038 |
| rcor1 | 0.079 | sox2 | -0.038 |
| ccna1 | 0.078 | rps2 | -0.038 |
| fam113 | 0.078 | wnt11f2 | -0.038 |
| zgc:110329 | 0.078 | efnb2b | -0.037 |
| zgc:77118 | 0.078 | ybx1 | -0.037 |
| hm13 | 0.078 | rps12 | -0.037 |
| gtf2a1 | 0.078 | polr3gla | -0.037 |
| ctss2.1 | 0.077 | si:ch211-137a8.4 | -0.037 |
| ctsla | 0.077 | si:ch211-152c2.3 | -0.037 |
| avd | 0.077 | si:dkey-66i24.9 | -0.036 |
| exd2 | 0.077 | apoeb | -0.036 |
| zc3hc1 | 0.077 | hmga1a | -0.036 |
| mkrn4 | 0.076 | pitx2 | -0.036 |
| blf | 0.076 | add3b | -0.035 |
| plcd1b | 0.076 | rplp1 | -0.035 |