| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pitx1 | 0.266 | cnmd | -0.084 |
| scinla | 0.250 | sox9a | -0.077 |
| spock3 | 0.249 | cthrc1a | -0.074 |
| tkta | 0.248 | col9a1a | -0.073 |
| pitx2 | 0.237 | col9a2 | -0.072 |
| si:dkey-164f24.2 | 0.236 | col9a3 | -0.072 |
| pitx3 | 0.234 | fgfbp2b | -0.072 |
| lrrc58a | 0.233 | six1a | -0.071 |
| wnt9b | 0.230 | hapln1a | -0.070 |
| fgl2a | 0.227 | foxc1b | -0.069 |
| timp4.1 | 0.225 | rplp2l | -0.069 |
| cadm4 | 0.220 | fibina | -0.068 |
| gyg1b | 0.217 | tgfbi | -0.067 |
| stmn1b | 0.206 | si:dkey-261h17.1 | -0.062 |
| tubb6 | 0.205 | col2a1b | -0.061 |
| mgarp | 0.205 | rplp1 | -0.060 |
| qdpra | 0.196 | cxcl12a | -0.059 |
| gpm6ab | 0.193 | col2a1a | -0.058 |
| lmx1ba | 0.183 | si:dkey-151g10.6 | -0.058 |
| tfap2b | 0.180 | rps29 | -0.058 |
| acta2 | 0.178 | cd248b | -0.057 |
| aqp3b | 0.176 | rps19 | -0.056 |
| rtn1a | 0.176 | pmp22a | -0.056 |
| msi2a | 0.174 | rps12 | -0.055 |
| gbe1a | 0.173 | rpl37 | -0.055 |
| atp1a3a | 0.173 | foxp4 | -0.055 |
| fhl2a | 0.171 | rpl39 | -0.055 |
| gng3 | 0.170 | rpl36a | -0.053 |
| rtn1b | 0.169 | foxd1 | -0.052 |
| tuba1c | 0.169 | si:ch211-156j16.1 | -0.052 |
| sncb | 0.164 | tgfb2 | -0.051 |
| cotl1 | 0.164 | epyc | -0.051 |
| elavl4 | 0.162 | hey1 | -0.051 |
| gpm6aa | 0.161 | pcdh18b | -0.051 |
| rcan2 | 0.160 | cxcl12b | -0.051 |