| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| prop1 | 0.308 | elavl3 | -0.196 |
| slc16a9a | 0.301 | stmn1b | -0.187 |
| rbp5 | 0.257 | pvalb5 | -0.183 |
| pitx3 | 0.254 | tspan2a | -0.181 |
| BX248331.2 | 0.253 | adcyap1b | -0.181 |
| btg2 | 0.239 | LOC100537342 | -0.171 |
| her6 | 0.239 | si:dkeyp-75h12.5 | -0.162 |
| fosab | 0.235 | ptmaa | -0.159 |
| sox2 | 0.232 | ebf3a | -0.158 |
| wls | 0.229 | fthl31 | -0.156 |
| junba | 0.226 | atf5a | -0.155 |
| id3 | 0.225 | abhd2b | -0.151 |
| cfl1l | 0.224 | fstl5 | -0.151 |
| six3b | 0.223 | si:ch211-237l4.6 | -0.146 |
| actb2 | 0.220 | olfm1b | -0.145 |
| six1b | 0.217 | fabp10b | -0.145 |
| klf6a | 0.217 | cnga4 | -0.144 |
| zgc:158343 | 0.217 | gnao1b | -0.144 |
| her9 | 0.214 | bcl11ba | -0.143 |
| ahnak | 0.214 | rnasekb | -0.143 |
| LHX3 | 0.211 | si:ch211-153b23.5 | -0.142 |
| qkia | 0.210 | gng3 | -0.142 |
| fgfbp1b | 0.210 | chga | -0.142 |
| sparc | 0.209 | s100z | -0.141 |
| cd151l | 0.208 | gng13b | -0.141 |
| sox13 | 0.208 | zgc:65894 | -0.141 |
| svild | 0.208 | aplp1 | -0.140 |
| nanos1 | 0.207 | fthl30 | -0.139 |
| egr1 | 0.205 | atp2b1b | -0.139 |
| sdc4 | 0.205 | sncb | -0.138 |
| dag1 | 0.204 | cdc25d | -0.137 |
| COX7A2 (1 of many) | 0.203 | si:ch211-10a23.2 | -0.137 |
| fabp3 | 0.201 | flrt1b | -0.137 |
| krt8 | 0.200 | si:rp71-17i16.6 | -0.134 |
| sox3 | 0.200 | uncx | -0.134 |