| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| wnt11f2 | 0.261 | sox3 | -0.179 |
| tbxta | 0.227 | sox19a | -0.123 |
| fgf8a | 0.210 | cxcr4b | -0.114 |
| sebox | 0.199 | id1 | -0.107 |
| osr1 | 0.182 | aldob | -0.089 |
| ndr2 | 0.180 | cxcr4a | -0.089 |
| arl4ab | 0.176 | sox2 | -0.086 |
| lhx1a | 0.171 | zic2b | -0.083 |
| fscn1a | 0.165 | inka1a | -0.080 |
| fgf3 | 0.164 | gpd1b | -0.079 |
| lft1 | 0.160 | foxd5 | -0.079 |
| dkk1b | 0.155 | LOC108190024 | -0.069 |
| BX927327.1 | 0.153 | foxh1 | -0.066 |
| mespab | 0.150 | sfrp1a | -0.065 |
| tbx16 | 0.149 | shisa2a | -0.065 |
| hes6 | 0.148 | pfkfb4b | -0.065 |
| cyp27c1 | 0.145 | hmgb2a | -0.064 |
| pitx2 | 0.141 | zgc:64022 | -0.064 |
| fgf17 | 0.139 | si:ch211-170d8.2 | -0.064 |
| foxa3 | 0.138 | pkdccb | -0.063 |
| zic2a | 0.138 | si:ch211-222l21.1 | -0.063 |
| tpbga | 0.136 | si:ch211-152c2.3 | -0.061 |
| dusp4 | 0.135 | asb11 | -0.059 |
| xbp1 | 0.134 | sult6b1 | -0.059 |
| wu:fb97g03 | 0.134 | alcamb | -0.059 |
| ddit4 | 0.131 | crabp2b | -0.059 |
| noto | 0.131 | si:ch1073-80i24.3 | -0.056 |
| foxa | 0.129 | add3b | -0.055 |
| FP102169.1 | 0.129 | pnx | -0.055 |
| aplnrb | 0.126 | prdm14 | -0.053 |
| ndr1 | 0.125 | mych | -0.052 |
| arg2 | 0.125 | cited4b | -0.052 |
| rdh10a | 0.124 | her8a | -0.050 |
| trib3 | 0.123 | anp32b | -0.050 |
| lft2 | 0.121 | si:ch211-133n4.4 | -0.050 |