| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.242 | hmga1a | -0.213 |
| h1m | 0.232 | si:ch73-1a9.3 | -0.183 |
| acp5a | 0.224 | si:ch211-222l21.1 | -0.171 |
| glulb | 0.222 | ptmab | -0.169 |
| zgc:173742 | 0.217 | add3b | -0.165 |
| ctsba | 0.216 | eef1a1l1 | -0.150 |
| zgc:56676 | 0.214 | hmgb2a | -0.142 |
| mkrn4 | 0.213 | hnrnpa0b | -0.137 |
| spink2.1 | 0.211 | dynll1 | -0.135 |
| rbm7 | 0.209 | anp32e | -0.135 |
| blf | 0.208 | alcamb | -0.133 |
| ccna1 | 0.203 | hspb1 | -0.132 |
| ccna2 | 0.200 | ybx1 | -0.130 |
| lamp2 | 0.199 | hmgn2 | -0.127 |
| npc2 | 0.198 | si:ch211-152c2.3 | -0.126 |
| gtf2a1 | 0.198 | crabp2b | -0.125 |
| epcam | 0.197 | npm1a | -0.125 |
| dnajc1 | 0.196 | sox2 | -0.124 |
| cldnd | 0.196 | hmgn6 | -0.121 |
| si:dkey-42i9.4 | 0.194 | si:ch73-281n10.2 | -0.120 |
| gdf3 | 0.188 | rplp1 | -0.120 |
| inka1a | 0.185 | rpl7 | -0.119 |
| si:dkey-68o6.5 | 0.185 | hsp90ab1 | -0.117 |
| dctpp1 | 0.185 | sept12 | -0.117 |
| rcor1 | 0.184 | hmgn7 | -0.116 |
| pttg1 | 0.179 | nop2 | -0.115 |
| fdx1 | 0.177 | rpl7a | -0.114 |
| slc16a3 | 0.177 | apoeb | -0.113 |
| zgc:77118 | 0.176 | rpsa | -0.113 |
| ctss2.1 | 0.173 | si:ch211-137a8.4 | -0.112 |
| sugt1 | 0.171 | si:dkey-56m19.5 | -0.111 |
| gtf2e2 | 0.167 | h2afvb | -0.110 |
| bzw1b | 0.167 | NC-002333.4 | -0.110 |
| ccne1 | 0.167 | apoc1 | -0.110 |
| ube2g1a | 0.167 | rps12 | -0.110 |