| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| foxd1 | 0.133 | syt5b | -0.048 |
| rbpms2b | 0.096 | crx | -0.042 |
| rbpms2a | 0.094 | neurod4 | -0.042 |
| epha3 | 0.090 | hmgb2a | -0.041 |
| epha4b | 0.087 | vsx1 | -0.040 |
| inab | 0.085 | otx5 | -0.039 |
| isl2b | 0.084 | pvalb2 | -0.038 |
| islr2 | 0.084 | anp32e | -0.037 |
| zgc:158291 | 0.083 | si:ch73-1a9.3 | -0.037 |
| pou4f2 | 0.080 | actc1b | -0.035 |
| pou6f2 | 0.078 | fabp7a | -0.035 |
| pou4f1 | 0.078 | pvalb1 | -0.034 |
| pax6a | 0.076 | rs1a | -0.034 |
| c1qtnf12 | 0.074 | ptmab | -0.033 |
| stmn2a | 0.073 | nrn1lb | -0.033 |
| cx43 | 0.072 | samsn1a | -0.033 |
| stmn2b | 0.071 | mylz3 | -0.032 |
| atp1b3a | 0.069 | vamp1 | -0.031 |
| pou4f3 | 0.069 | si:ch1073-83n3.2 | -0.031 |
| irx4a | 0.068 | gnb3a | -0.029 |
| zfhx3 | 0.068 | cplx4a | -0.029 |
| alcama | 0.067 | stx3a | -0.028 |
| syt2a | 0.067 | LOC103909376 | -0.028 |
| ppp1r14ba | 0.067 | CABZ01038709.1 | -0.028 |
| xpr1a | 0.066 | calb2b | -0.028 |
| rtn1b | 0.066 | cnrip1b | -0.028 |
| flrt3 | 0.066 | foxg1b | -0.027 |
| tenm3 | 0.065 | atp2b1b | -0.027 |
| nrn1a | 0.065 | myhz1.1 | -0.027 |
| kif26bb | 0.065 | gabrr1 | -0.027 |
| cxxc4 | 0.064 | tnnt3b | -0.027 |
| gap43 | 0.064 | ndrg1b | -0.027 |
| pcbp4 | 0.064 | npdc1a | -0.027 |
| rapgef2 | 0.064 | her4.2 | -0.027 |
| cntn2 | 0.063 | hmgn6 | -0.026 |