Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fzd5 | 0.107 | ckbb | -0.059 |
| ccnd1 | 0.086 | atp6v0cb | -0.044 |
| her4.1 | 0.080 | atp6v1e1b | -0.043 |
| her12 | 0.079 | snap25b | -0.041 |
| XLOC-003690 | 0.074 | rnasekb | -0.039 |
| notch3 | 0.074 | gapdhs | -0.039 |
| XLOC-003689 | 0.072 | atp6v1g1 | -0.036 |
| id1 | 0.071 | xbp1 | -0.036 |
| pcna | 0.071 | syt5b | -0.034 |
| XLOC-003692 | 0.070 | sypb | -0.034 |
| mcm7 | 0.070 | atpv0e2 | -0.034 |
| vsx2 | 0.070 | crx | -0.033 |
| her15.1 | 0.069 | stmn1b | -0.033 |
| rrm1 | 0.069 | otx5 | -0.033 |
| zfp36l1a | 0.068 | ppdpfb | -0.032 |
| her4.2 | 0.067 | ndrg4 | -0.032 |
| lfng | 0.067 | sncb | -0.032 |
| LO018260.2 | 0.066 | vamp2 | -0.032 |
| col28a2b | 0.066 | pvalb1 | -0.032 |
| rrm2 | 0.064 | atp1a3a | -0.032 |
| gas1b | 0.064 | atp1b2a | -0.031 |
| lbr | 0.063 | mdkb | -0.031 |
| mki67 | 0.062 | gng3 | -0.031 |
| zgc:165555.3 | 0.062 | rs1a | -0.031 |
| notch1b | 0.062 | ppp1r14c | -0.030 |
| CABZ01005379.1 | 0.061 | calm1a | -0.030 |
| nr2e1 | 0.061 | hmgn6 | -0.030 |
| dla | 0.061 | atp6ap2 | -0.030 |
| sb:cb81 | 0.061 | oaz1b | -0.030 |
| tuba8l | 0.061 | pvalb2 | -0.030 |
| her4.4 | 0.060 | oaz1a | -0.029 |
| nasp | 0.059 | gng13b | -0.029 |
| nutf2l | 0.059 | rtn1a | -0.029 |
| sox9b | 0.059 | scrt2 | -0.029 |
| sox2 | 0.058 | ndrg1b | -0.028 |