Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fzd5 | 0.090 | pmp22a | -0.016 |
| vsx2 | 0.059 | sparc | -0.016 |
| rx1 | 0.048 | mfap2 | -0.014 |
| XLOC-003718 | 0.043 | col1a1a | -0.013 |
| hes2.2 | 0.039 | col1a2 | -0.013 |
| rx2 | 0.037 | lrrc17 | -0.013 |
| nr2e1 | 0.035 | col5a1 | -0.013 |
| ccnd1 | 0.034 | col1a1b | -0.012 |
| rrm1 | 0.034 | col2a1b | -0.012 |
| foxn4 | 0.033 | fstl1b | -0.012 |
| six3b | 0.033 | krt18b | -0.012 |
| lbr | 0.032 | tuba8l3 | -0.012 |
| tbx2b | 0.032 | twist1a | -0.012 |
| CABZ01005379.1 | 0.030 | xbp1 | -0.012 |
| mcm7 | 0.030 | pax3a | -0.011 |
| mki67 | 0.030 | tgfbi | -0.011 |
| sox18 | 0.030 | vwde | -0.011 |
| pcna | 0.029 | bhmt | -0.011 |
| six6b | 0.029 | si:ch211-286o17.1 | -0.011 |
| sox2 | 0.029 | ahnak | -0.010 |
| vax2 | 0.029 | cd248b | -0.010 |
| zgc:165555.3 | 0.029 | col11a1a | -0.010 |
| ascl1a | 0.028 | col11a1b | -0.010 |
| cldnc | 0.028 | col5a2a | -0.010 |
| crip3 | 0.028 | colec12 | -0.010 |
| rrm2 | 0.028 | CU929237.1 | -0.010 |
| cyp1b1 | 0.027 | cyt1 | -0.010 |
| pnpla6 | 0.027 | dcn | -0.010 |
| si:dkey-238o13.4 | 0.027 | emp2 | -0.010 |
| rorb | 0.027 | krtt1c19e | -0.010 |
| cenpe | 0.026 | pdgfra | -0.010 |
| mybl1 | 0.026 | postnb | -0.010 |
| si:dkeyp-34c12.1 | 0.026 | rbp4 | -0.010 |
| si:dkey-261m9.17 | 0.026 | serpinh1b | -0.010 |
| cenpf | 0.025 | six1a | -0.010 |