| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hes6 | 0.205 | syt5b | -0.136 |
| sox11b | 0.189 | otx5 | -0.124 |
| insm1a | 0.188 | snap25b | -0.122 |
| foxn4 | 0.184 | sypb | -0.120 |
| LOC100537384 | 0.180 | crx | -0.119 |
| alcama | 0.169 | gapdhs | -0.112 |
| si:ch211-222l21.1 | 0.165 | atp6v0cb | -0.110 |
| tfap2d | 0.165 | rs1a | -0.109 |
| si:ch211-284f22.3 | 0.155 | calb2b | -0.104 |
| mex3b | 0.153 | anp32e | -0.097 |
| tp53inp2 | 0.151 | atpv0e2 | -0.097 |
| tspan7 | 0.151 | gnb3a | -0.095 |
| rpl9 | 0.149 | pcp4l1 | -0.094 |
| mycla | 0.146 | samsn1a | -0.094 |
| ahcy | 0.144 | ckbb | -0.094 |
| fabp3 | 0.144 | atp6v1e1b | -0.090 |
| hes2.2 | 0.144 | cnrip1b | -0.088 |
| tubb2b | 0.144 | lin7a | -0.088 |
| hmgb1b | 0.142 | fxyd6l | -0.084 |
| hnrnpa0l | 0.139 | sh3gl2a | -0.084 |
| adcyap1b | 0.137 | cplx4a | -0.084 |
| onecut1 | 0.137 | scg3 | -0.083 |
| hes2.1 | 0.137 | stx3a | -0.083 |
| rbpms2b | 0.136 | ctbp2a | -0.082 |
| FO082781.1 | 0.136 | nrn1lb | -0.082 |
| sinhcafl | 0.136 | bhlhe23 | -0.082 |
| cdk1 | 0.136 | tpi1b | -0.082 |
| hmgb2b | 0.134 | atp1b2a | -0.082 |
| pax6a | 0.133 | stxbp1b | -0.081 |
| arpp19b | 0.132 | atp2b1b | -0.081 |
| tuba1a | 0.132 | atp6ap2 | -0.081 |
| ccnb3 | 0.131 | vamp1 | -0.081 |
| plk1 | 0.131 | atp1a3a | -0.080 |
| pou2f2a | 0.131 | gnao1b | -0.079 |
| lbr | 0.131 | gnb5b | -0.078 |