| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| crx | 0.138 | pax6a | -0.084 |
| otx5 | 0.135 | pax6b | -0.082 |
| ddah2 | 0.129 | elavl3 | -0.069 |
| btg1 | 0.119 | mir181b-3 | -0.065 |
| tp53inp1 | 0.108 | pcna | -0.060 |
| gnb3a | 0.106 | hes2.2 | -0.059 |
| ndrg1b | 0.104 | rrm1 | -0.059 |
| hunk | 0.102 | hes6 | -0.059 |
| chst1 | 0.101 | stmn1a | -0.058 |
| nsg2 | 0.100 | mab21l1 | -0.058 |
| fkbp1ab | 0.099 | atoh7 | -0.058 |
| tmem108 | 0.096 | celf2 | -0.057 |
| daam1a | 0.095 | sox11b | -0.057 |
| foxo4 | 0.093 | onecut1 | -0.056 |
| nol4la | 0.092 | barhl2 | -0.055 |
| vsx1 | 0.092 | banf1 | -0.054 |
| mpp6b | 0.091 | CABZ01005379.1 | -0.053 |
| samsn1a | 0.090 | slc32a1 | -0.053 |
| ddit3 | 0.090 | stxbp1a | -0.053 |
| cspg5b | 0.088 | nasp | -0.053 |
| pcp4l1 | 0.088 | her4.2 | -0.052 |
| SEMA4F | 0.087 | si:ch211-137a8.4 | -0.052 |
| gng13b | 0.086 | lig1 | -0.052 |
| lhx4 | 0.085 | tmsb4x | -0.051 |
| smad7 | 0.085 | dla | -0.051 |
| bcl2l10 | 0.082 | rbfox2 | -0.051 |
| kdm2bb | 0.082 | sncgb | -0.051 |
| scg3 | 0.080 | nfasca | -0.051 |
| scrt2 | 0.080 | rrm2 | -0.051 |
| gpm6ab | 0.080 | syt1a | -0.050 |
| igsf9b | 0.079 | tfap2a | -0.050 |
| dscaml1 | 0.079 | pax10 | -0.049 |
| ctbp2a | 0.079 | LOC100537384 | -0.048 |
| lrrfip1b | 0.078 | rpa3 | -0.048 |
| syt5b | 0.078 | foxn4 | -0.048 |