| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nhlh2 | 0.297 | ntn1a | -0.142 |
| dlb | 0.297 | si:ch73-265d7.2 | -0.132 |
| ebf2 | 0.286 | ntn1b | -0.119 |
| zgc:77784 | 0.261 | cd82a | -0.111 |
| olig4 | 0.237 | fzd7a | -0.111 |
| tp53inp2 | 0.236 | metrnla | -0.108 |
| fstl1a | 0.228 | zgc:55461 | -0.107 |
| elavl3 | 0.221 | ptch2 | -0.105 |
| myt1a | 0.220 | shha | -0.095 |
| robo3 | 0.214 | tuba8l | -0.092 |
| insm1b | 0.213 | fabp7a | -0.092 |
| scrt2 | 0.208 | cd81a | -0.088 |
| insm1a | 0.208 | msna | -0.087 |
| srrm4 | 0.204 | fosab | -0.087 |
| spsb4a | 0.202 | her8a | -0.085 |
| hes6 | 0.201 | plp1a | -0.085 |
| lima1a | 0.195 | cspg5a | -0.083 |
| myt1b | 0.193 | sox19a | -0.083 |
| hoxb9a | 0.189 | crip2 | -0.082 |
| scrt1a | 0.189 | CABZ01093502.1 | -0.082 |
| BX530077.1 | 0.188 | pou3f3a | -0.082 |
| jagn1a | 0.188 | sdc4 | -0.081 |
| sept5a | 0.187 | daw1 | -0.080 |
| gdf11 | 0.185 | slc6a9 | -0.080 |
| si:dkey-56m19.5 | 0.184 | spon1b | -0.079 |
| hoxa9a | 0.183 | dbx1b | -0.079 |
| ebf3a | 0.180 | hmga2 | -0.078 |
| olig3 | 0.180 | nkx2.9 | -0.078 |
| stap2a | 0.179 | her6 | -0.078 |
| neurod4 | 0.175 | sparc | -0.077 |
| tmeff1b | 0.170 | metrn | -0.076 |
| onecut2 | 0.170 | nkx2.2b | -0.076 |
| elovl4a | 0.169 | sulf2a | -0.076 |
| tuba8l3 | 0.167 | ptn | -0.076 |
| notch1a | 0.166 | jun | -0.076 |