| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx4b | 0.619 | cthrc1a | -0.145 |
| dlx4a | 0.606 | akap12b | -0.129 |
| dlx5a | 0.557 | tnn | -0.116 |
| dlx6a | 0.392 | cnmd | -0.110 |
| dlx1a | 0.308 | marcksl1b | -0.110 |
| dlx2a | 0.296 | ca6 | -0.108 |
| barx1 | 0.254 | ccl25b | -0.108 |
| fgfbp2a | 0.250 | fstl1a | -0.100 |
| grem2b | 0.249 | pcolcea | -0.100 |
| ptgdsb.2 | 0.244 | emilin1a | -0.099 |
| CU929240.1 | 0.243 | si:dkey-56m19.5 | -0.097 |
| shox | 0.229 | postnb | -0.095 |
| mab21l2 | 0.222 | matn4 | -0.095 |
| ecrg4a | 0.212 | ebf3a | -0.095 |
| spon2b | 0.204 | tbx15 | -0.093 |
| msx1a | 0.199 | raraa | -0.092 |
| si:dkey-12l12.1 | 0.190 | tfpia | -0.092 |
| hapln1a | 0.164 | si:ch211-251b21.1 | -0.092 |
| cxxc4 | 0.152 | meis2b | -0.087 |
| nr2f1b | 0.150 | alx1 | -0.086 |
| sgms2a | 0.149 | tmsb4x | -0.086 |
| ahcy | 0.149 | cd82a | -0.085 |
| ptgdsb.1 | 0.147 | pbx1b | -0.084 |
| phlda3 | 0.142 | tmem88b | -0.084 |
| twist2 | 0.136 | ftr82 | -0.083 |
| sept5a | 0.135 | col2a1a | -0.083 |
| sem1 | 0.135 | crabp1b | -0.082 |
| tmem119a | 0.134 | tgfbi | -0.081 |
| emx2 | 0.134 | NC-002333.4 | -0.080 |
| epha4b | 0.134 | CABZ01072614.1 | -0.079 |
| ifitm5 | 0.133 | zic2a | -0.079 |
| panx3 | 0.132 | nid1b | -0.078 |
| phex | 0.128 | col4a1 | -0.078 |
| cd81b | 0.127 | col11a1a | -0.078 |
| entpd5a | 0.125 | si:dkey-238c7.16 | -0.078 |